Accession
MI0000308
Description
Caenorhabditis elegans
cel-mir-233 precursor miRNA mir-233
Gene
family?
family?
RF00857;
mir-233
Literature search
5 open access papers mention cel-mir-233
(107 sentences)
(107 sentences)
Sequence
15880
reads,
249
reads per million, 15 experiments
auauagcaucuuucugucUCGCCCAUCCCGUUGCUCCAAUAuucuaacaacaagugauuaUUGAGCAAUGCGCAUGUGCGGGAuagacugauggcugc
...(((((((..((((((((((.(((.(((((((((.((((.((...........)).)))))))))))).).))).))))))))))..))).)))).
...(((((((..((((((((((.(((.(((((((((.((((.((...........)).)))))))))))).).))).))))))))))..))).)))).
Structure
aua - uu C C - C u uaac uagc auc ucugucUCGC CAU C CGUUGCUC AAUA uc a |||| ||| |||||||||| ||| | |||||||| |||| || a gucg uag agauAGGGCG GUA G GUAACGAG UUau ag c --c g uc U C C - u ugaa
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chrX: 12078587-12078684 [-]
Database links
Mature cel-miR-233-3p
| Accession | MIMAT0000288 |
| Description | Caenorhabditis elegans cel-miR-233-3p mature miRNA |
| Sequence | 61 - UUGAGCAAUGCGCAUGUGCGGGA - 83 |
| Evidence |
experimental
cloned [1], Northern [1], 454 [3], Illumina [4,6], CLIPseq [5] |
| Database links |
|
| Predicted targets |
|
Mature cel-miR-233-5p
| Accession | MIMAT0020329 |
| Description | Caenorhabditis elegans cel-miR-233-5p mature miRNA |
| Sequence | 19 - UCGCCCAUCCCGUUGCUCCAAUA - 41 |
| Evidence |
experimental
Illumina [6] |
| Database links |
|
References
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