Accession
MI0000054
Description
Caenorhabditis elegans
cel-mir-83 precursor miRNA mir-83
Gene
family?
family?
RF00812;
mir-83
Literature search
3 open access papers mention cel-mir-83
(3 sentences)
(3 sentences)
Sequence
64792
reads,
1071
reads per million, 14 experiments
agcaccacucggaaccACUGAAUUUAUGUGUGUACUUGAcggccaacaagagcaucgaucUAGCACCAUAUAAAUUCAGUAAuuucgcgucgagagcu
(((.((((.(((((..((((((((((((((.((.((.((((((........))..)).)).)).))))))))))))))))..))))).)).).).)))
(((.((((.(((((..((((((((((((((.((.((.((((((........))..)).)).)).))))))))))))))))..))))).)).).).)))
Structure
a - - u cc U A U - -- caa agc c c ac cggaa ACUGAAUUUAUGUG GU CU GA cg gc c ||| | | || ||||| |||||||||||||| || || || || || ucg g g ug gcuuu UGACUUAAAUAUAC CA GA cu gc cg a a a c c AA - C U a ua aga
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chrIV: 7841631-7841728 [+]
Database links
Mature cel-miR-83-3p
| Accession | MIMAT0000056 |
| Description | Caenorhabditis elegans cel-miR-83-3p mature miRNA |
| Sequence | 61 - UAGCACCAUAUAAAUUCAGUAA - 82 |
| Evidence |
experimental
cloned [1-3], 454 [4], Illumina [5,7], CLIPseq [6] |
| Database links |
|
| Predicted targets |
|
Mature cel-miR-83-5p
| Accession | MIMAT0020775 |
| Description | Caenorhabditis elegans cel-miR-83-5p mature miRNA |
| Sequence | 17 - ACUGAAUUUAUGUGUGUACUUGA - 39 |
| Evidence |
experimental
Illumina [7] |
| Database links |
|
References
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