Accession
MI0000048
Description
Caenorhabditis elegans
cel-mir-77 precursor miRNA mir-77
Gene
family?
family?
RF00827;
mir-77
Literature search
2 open access papers mention cel-mir-77
(2 sentences)
(2 sentences)
Sequence
131146
reads,
3311
reads per million, 13 experiments
gcaucugccaaaccgcccguuugGAUGGUUGUGCUCUGAGGAAAUacgcacagaaugucauUUCAUCAGGCCAUAGCUGUCCAaauugguauagaguuug
((....))(((((((((.(((((((((((((((.(((((.(((((..(((.....))).))))).))))).))))))))))))))).)))...).)))))
((....))(((((((((.(((((((((((((((.(((((.(((((..(((.....))).))))).))))).))))))))))))))).)))...).)))))
Structure
gcaucugc - --- c C G ac c
caaac c gcc guuugGAUGGUUGUG UCUGA GAAAU gca a
||||| | ||| ||||||||||||||| ||||| ||||| ||| g
guuug g ugg uaaACCUGUCGAUAC GGACU CUUua ugu a
-------- a aua u C A -c a
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chrII: 12519268-12519367 [+]
Database links
Mature cel-miR-77-3p
| Accession | MIMAT0000049 |
| Description | Caenorhabditis elegans cel-miR-77-3p mature miRNA |
| Sequence | 62 - UUCAUCAGGCCAUAGCUGUCCA - 83 |
| Evidence |
experimental
cloned [1-2], 454 [3], Illumina [4,6], CLIPseq [5] |
| Database links |
|
| Predicted targets |
|
Mature cel-miR-77-5p
| Accession | MIMAT0020774 |
| Description | Caenorhabditis elegans cel-miR-77-5p mature miRNA |
| Sequence | 24 - GAUGGUUGUGCUCUGAGGAAAU - 45 |
| Evidence |
experimental
Illumina [6] |
| Database links |
|
