Accession
MI0000050
Description
Caenorhabditis elegans
cel-mir-79 precursor miRNA
Literature search
4 open access papers mention cel-mir-79
(4 sentences)
(4 sentences)
Sequence
25131
reads,
4229
reads per million, 16 experiments
uaguagacauucuccgauCUUUGGUGAUUCAGCUUCAAUGAuuggcuacagguuucuuucAUAAAGCUAGGUUACCAAAGCUcggcgucuugaucuac
..(((((((..(.((((.(((((((((((.(((((..((((..((((...))))....)))).))))).))))))))))).)))).)...)).)))))
..(((((((..(.((((.(((((((((((.(((((..((((..((((...))))....)))).))))).))))))))))).)))).)...)).)))))
Structure
ua - -uu u u C CA --uu a guaga ca c ccga CUUUGGUGAUU AGCUU AUGA ggcu ||||| || | |||| ||||||||||| ||||| |||| |||| c caucu gu g ggcU GAAACCAUUGG UCGAA UAcu uugg -- a ucu c C A -A uucu a
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
chrI: 9332946-9333043 [+]
Database links
Mature cel-miR-79-3p
| Accession | MIMAT0000051 |
| Description | Caenorhabditis elegans cel-miR-79-3p mature miRNA |
| Sequence | 61 - AUAAAGCUAGGUUACCAAAGCU - 82 |
| Evidence |
experimental
cloned [1-3], PCR [4], 454 [5], Illumina [6,8], CLIPseq [7] |
| Database links |
|
| Predicted targets |
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Mature cel-miR-79-5p
| Accession | MIMAT0020322 |
| Description | Caenorhabditis elegans cel-miR-79-5p mature miRNA |
| Sequence | 19 - CUUUGGUGAUUCAGCUUCAAUGA - 41 |
| Evidence |
experimental
Illumina [8] |
| Database links |
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References
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