Accession
MI0000056
Description
Caenorhabditis elegans
cel-mir-85 precursor miRNA mir-85
Gene
family?
family?
RF00810;
mir-85
Literature search
2 open access papers mention cel-mir-85
(5 sentences)
(5 sentences)
Sequence
120606
reads,
2578
reads per million, 13 experiments
uauagaauuuuggcgucggagcCCGAUUUUUCAAUAGUUUGAAACcaguguacacauaaaugguUACAAAGUAUUUGAAAAGUCGUGCucugaaaaugaauucuua
...(((((((.....(((((((.(((((((((((((.((((.((((((((....)))...))))).)))).)).))))))))))).)))))))....)))))))..
...(((((((.....(((((((.(((((((((((((.((((.((((((((....)))...))))).)))).)).))))))))))).)))))))....)))))))..
Structure
uau uggcg C - G A --- u agaauuu ucggagc CGAUUUUUCAA UA UUUG AACca gug a ||||||| ||||||| ||||||||||| || |||| ||||| ||| ucuuaag agucuCG GCUGAAAAGUU AU AAAC Uuggu uac c -au -uaaa U U G A aaa a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chrII: 8393553-8393658 [+]
Database links
Mature cel-miR-85-3p
| Accession | MIMAT0000058 |
| Description | Caenorhabditis elegans cel-miR-85-3p mature miRNA |
| Sequence | 65 - UACAAAGUAUUUGAAAAGUCGUGC - 88 |
| Evidence |
experimental
cloned [1-3], 454 [4], Illumina [5,7], CLIPseq [6] |
| Database links |
|
| Predicted targets |
|
Mature cel-miR-85-5p
| Accession | MIMAT0020324 |
| Description | Caenorhabditis elegans cel-miR-85-5p mature miRNA |
| Sequence | 23 - CCGAUUUUUCAAUAGUUUGAAAC - 45 |
| Evidence |
experimental
Illumina [7] |
| Database links |
|
References
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