Accession
MI0000331
Description
Caenorhabditis elegans
cel-mir-255 precursor miRNA mir-255
Gene
family?
family?
RF00900;
mir-255
Literature search
1 open access papers mention cel-mir-255
(1 sentences)
(1 sentences)
Sequence
3948
reads,
54
reads per million, 16 experiments
cagugguucgacuaaauuuuggagGUAAGAAAUCUUUGUAGUUCUCcguauugugacgugaAAACUGAAGAGAUUUUUUACAGacuucacaaauuugaaauauauuccug
(((.(((.....(((((((((((((((((((((((((.(((((.(((((......))).)).))))).)))))))))))))...))))).)))))))......))).)))
(((.(((.....(((((((((((((((((((((((((.(((((.(((((......))).)).))))).)))))))))))))...))))).)))))))......))).)))
Structure
u -ucgac - --- G C - au cag ggu uaaauuu uggag GUAAGAAAUCUUU UAGUU UC cgu u ||| ||| ||||||| ||||| ||||||||||||| ||||| || ||| guc uua guuuaaa acuuc CAUUUUUUAGAGA GUCAA ag gca g c uauaaa c aGA A A u gu
Annotation confidence
Medium
Do you think this miRNA is real?
Comments
This precursor sequence was identified computationally using sequence homology with C. briggsae [1]. The mature microRNA was identified later [2].
Genome context
chrV: 5440639-5440748 [+]
Database links
Mature cel-miR-255-3p
| Accession | MIMAT0004216 |
| Description | Caenorhabditis elegans cel-miR-255-3p mature miRNA |
| Sequence | 62 - AAACUGAAGAGAUUUUUUACAG - 83 |
| Evidence |
experimental
cloned [2], Illumina [3,5], CLIPseq [4] |
| Database links |
|
| Predicted targets |
|
Mature cel-miR-255-5p
| Accession | MIMAT0020341 |
| Description | Caenorhabditis elegans cel-miR-255-5p mature miRNA |
| Sequence | 25 - GUAAGAAAUCUUUGUAGUUCUC - 46 |
| Evidence |
experimental
Illumina [5] |
