miRBase entry: cbr-mir-784

Stem-loop cbr-mir-784


Accession
MI0005417
Description
Caenorhabditis briggsae cbr-mir-784 precursor miRNA


Sequence

378 reads, 50.0 reads per million, 3 experiments
cuaccaagUGGCACAAUACCUGUAUGUAGAuagugaaguaauauuguucUACAUACACCUAUUGAGCCACCUGGugg
((((((.(((((.(((((..(((((((((((((((......))))).))))))))))..))))).))))).))))))

Structure
      a     A     CC          -     aa 
cuacca gUGGC CAAUA  UGUAUGUAGA uagug  g
|||||| ||||| |||||  |||||||||| |||||   
gguGGU CACCG GUUAU  ACAUACAUcu guuau  u
      C     A     CC          u     aa 


Annotation confidence Medium
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Genome context
chrX: 13857294-13857370 [-]

Database links

Mature cbr-miR-784-5p

Accession MIMAT0004285
Description Caenorhabditis briggsae cbr-miR-784-5p mature miRNA
Sequence 9 - UGGCACAAUACCUGUAUGUAGA - 30
Evidence not_experimental

Mature cbr-miR-784-3p

Accession MIMAT0053566
Description Caenorhabditis briggsae cbr-miR-784-3p mature miRNA
Sequence 50 - UACAUACACCUAUUGAGCCACCUGG - 74
Evidence not_experimental

References

  1. PubMed ID: 17174894
    Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
    "Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP"
    "Cell (2006) 127:1193-1207