Accession
MI0000005
Description
Caenorhabditis elegans
cel-mir-34 precursor miRNA mir-34
Gene
family?
family?
RF00456;
mir-34
Literature search
10 open access papers mention cel-mir-34
(28 sentences)
(28 sentences)
Sequence
782992
reads,
2563
reads per million, 16 experiments
cggacaaugcucgagAGGCAGUGUGGUUAGCUGGUUGcauauuuccuugacaACGGCUACCUUCACUGCCACCCcgaacaugucguccaucuuugaa
.((((.(((.(((.(.(((((((.((.((((((.(((((........)).))))))))).)).)))))))..).))).)))...)))).........
.((((.(((.(((.(.(((((((.((.((((((.(((((........)).))))))))).)).)))))))..).))).)))...)))).........
Structure
--------c --a c a -A U U G - uau
ggac aug ucg g GGCAGUG GG UAGCUG UUG ca u
|||| ||| ||| | ||||||| || |||||| ||| ||
ccug uac agc C CCGUCAC UC AUCGGC Aac gu u
aaguuucua cug a C CA U C - a ucc
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chrX: 2969752-2969848 [-]
Database links
Mature cel-miR-34-5p
| Accession | MIMAT0000005 |
| Description | Caenorhabditis elegans cel-miR-34-5p mature miRNA |
| Sequence | 16 - AGGCAGUGUGGUUAGCUGGUUG - 37 |
| Evidence |
experimental
cloned [1-3], Northern [1], PCR [4], 454 [5], Illumina [6], CLIPseq [7] |
| Database links |
|
| Predicted targets |
|
Mature cel-miR-34-3p
| Accession | MIMAT0015093 |
| Description | Caenorhabditis elegans cel-miR-34-3p mature miRNA |
| Sequence | 53 - ACGGCUACCUUCACUGCCACCC - 74 |
| Evidence |
experimental
CLIPseq [7] |
| Database links |
|
References
|
