Search results

mir-34 family in Rfam (RF00456)

Summary
Human mir-34a was discovered computationally [1] and later experimentally verified [2]. The mature sequence is excised from the 5' arm of the hairpin. Precursor mir-34 imported from miRBase [4]
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5'

There are 118 hairpins in the mir-34 family

Name Accession RPM Chromosome Start End Strand Confidence
cel-mir-34 MI0000005 2563 chrX 2969752 2969848 - High
hsa-mir-34a MI0000268 442 chr1 9151668 9151777 - High
dme-mir-34 MI0000371 32763 chr3R 10100936 10101034 + High
mmu-mir-34c MI0000403 41135 chr9 51103034 51103110 - High
mmu-mir-34b MI0000404 3047 chr9 51103562 51103645 - High
cbr-mir-34 MI0000494 - chrX 3832359 3832451 + -
mmu-mir-34a MI0000584 514 chr4 150068454 150068555 + High
hsa-mir-34b MI0000742 437 chr11 111512938 111513021 + High
hsa-mir-34c MI0000743 1301 chr11 111513439 111513515 + High
rno-mir-34b MI0000875 474 chr8 55492542 55492625 - High
rno-mir-34c MI0000876 4613 chr8 55492024 55492100 - High
rno-mir-34a MI0000877 189 chr5 167092491 167092592 + High
gga-mir-34a MI0001251 50 chr21 3262992 3263100 - -
gga-mir-34b MI0001260 299 chr24 5539134 5539217 + High
gga-mir-34c MI0001261 771 chr24 5539871 5539944 + High
dps-mir-34 MI0001317 - 2 5019569 5019668 - -
dre-mir-34a MI0001365 145 chr23 22591058 22591155 + -
ggo-mir-34a MI0002796 - chr1 8834473 8834582 - -
age-mir-34a MI0002797 - None None -
ppa-mir-34a MI0002798 - chr1 9141308 9141417 - -
ppy-mir-34a MI0002799 - chr1 221288574 221288683 + -
ptr-mir-34a MI0002800 - chr1 8482192 8482301 - -
mml-mir-34a MI0002801 43 chr1 8320927 8321036 - -
sla-mir-34a MI0002802 - None None -
lla-mir-34a MI0002803 - None None -
mne-mir-34a MI0002804 - None None -
dre-mir-34b MI0003690 39 chr5 57922520 57922604 - -
bta-mir-34b MI0004763 11 chr15 22281681 22281764 + High
dre-mir-34c MI0004774 89 chr5 57922284 57922367 - High
xtr-mir-34a MI0004816 - chr7 80700727 80700822 - -
xtr-mir-34b-2 MI0004817 - chr7 75059637 75059703 - -
xtr-mir-34b-4 MI0004818 - None None -
xtr-mir-34b-3 MI0004924 - None None -
xtr-mir-34b-1 MI0004925 - chr7 75066349 75066433 + -
bmo-mir-34 MI0004975 267 NW_004581681.1 3813355 3813452 - High
bta-mir-34c MI0005068 18 chr15 22282382 22282458 + -
mdo-mir-34a MI0005280 65 chr4 433575257 433575367 + High
bta-mir-34a MI0005464 45 chr16 45359550 45359656 + -
ame-mir-34 MI0005739 - CM000058.5 6962684 6962783 + -
aga-mir-34 MI0006239 - chr2R 28232667 28232756 - -
oan-mir-34a MI0006850 1402 Contig8579 8107 8196 - High
mml-mir-34b MI0007604 551 chr14 104382402 104382485 + High
mml-mir-34c MI0007605 58503 chr14 104382905 104382981 + High
cfa-mir-34a MI0008101 - chr5 62485832 62485897 - -
cfa-mir-34c MI0008106 - chr5 21558106 21558160 - -
ssc-mir-34a MI0008216 16 None None -
ptr-mir-34b MI0008632 - chr11 111895234 111895316 + -
ptr-mir-34c MI0008633 - chr11 111895735 111895810 + -
tca-mir-34 MI0008906 - ChLG7 13763505 13763583 + -
dan-mir-34 MI0008974 - scaffold_13340 6489985 6490081 + -
der-mir-34 MI0009046 - scaffold_4770 15673314 15673409 - -
dgr-mir-34 MI0009170 - scaffold_14624 2267449 2267535 + -
dmo-mir-34 MI0009209 - scaffold_6540 11883371 11883457 - -
dpe-mir-34 MI0009269 - scaffold_19 725010 725106 - -
dse-mir-34 MI0009349 - scaffold_0 15986848 15986943 - -
dsi-mir-34 MI0009405 - chr3R 15449386 15449481 - -
dvi-mir-34 MI0009523 - scaffold_12855 2682554 2682640 - -
dwi-mir-34 MI0009551 - scf2_1100000004902 11166538 11166637 - -
dya-mir-34 MI0009653 - chr3R 9974472 9974567 + -
cte-mir-34 MI0010060 - KB292771.1 443325 443425 - -
lgi-mir-34 MI0010111 - KB199651.1 1151253 1151353 + -
spu-mir-34 MI0010195 - KN916283.1 1153963 1154063 + -
cfa-mir-34b MI0010332 - chr5 21558685 21558768 - -
bfl-mir-34b MI0010512 - GG666486.1 2117606 2117687 - -
crm-mir-34 MI0011057 - Crem_Contig15 1362286 1362373 + -
dpu-mir-34 MI0012244 - GL732526.1 1242035 1242135 - -
eca-mir-34a MI0012673 6 chr2 41934533 41934595 + -
eca-mir-34b MI0012741 225 chr7 20101138 20101221 + High
eca-mir-34c MI0012742 3580 chr7 20101717 20101793 + High
ssc-mir-34c-1 MI0013132 2544 chr9 44166873 44166952 - -
bma-mir-34 MI0013327 - Bmal_v3_scaffold3 1411673 1411783 + -
aae-mir-34 MI0013456 45559 supercont1.265 509521 509649 + High
tgu-mir-34a MI0013826 - chr21 5249928 5249999 + -
api-mir-34 MI0013935 - GL349754.1 863528 863595 + -
nvi-mir-34 MI0014743 - chr4 7973903 7974001 - -
ppy-mir-34b MI0014807 - chr11 108238803 108238886 + -
ppy-mir-34c MI0014808 - chr11 108239300 108239376 + -
tgu-mir-34c-1 MI0015939 - chr24 1752711 1752787 - -
tgu-mir-34c-2 MI0015969 - chrUn 76202851 76202927 - -
ngi-mir-34 MI0016631 - None None -
nlo-mir-34 MI0016676 - None None -
asu-mir-34 MI0018535 - None None -
aca-mir-34a MI0018857 - GL343521.1 196050 196111 - -
aca-mir-34b MI0018858 - GL343701.1 93368 93439 - -
aca-mir-34c MI0018859 - GL343521.1 197479 197551 - -
tur-mir-34 MI0019396 - None None -
cgr-mir-34a MI0020505 54 JH007589.1 3416 3500 - Low
cgr-mir-34b MI0020506 306 JH000115.1 808303 808380 + High
cgr-mir-34c MI0020507 53089 JH000115.1 808827 808900 + High
ggo-mir-34c MI0020670 - chr11 111455000 111455107 + -
ggo-mir-34b MI0020773 - chr11 111454504 111454613 + -
mse-mir-34 MI0021025 - JH668424.1 260678 260780 + -
hme-mir-34-1 MI0021779 - HE667979 348 476 - -
hme-mir-34-2 MI0021780 - HE669997 8000 8112 + -
ssc-mir-34c-2 MI0022128 2544 None None -
ccr-mir-34 MI0023392 - None None -
mdo-mir-34c MI0023815 28654 chr4 241888509 241888566 - High
mdo-mir-34b MI0023816 2309 chr4 241889198 241889256 - High
oan-mir-34b MI0024078 174 Contig8579 9814 9872 - High
ipu-mir-34a MI0024622 - None None -
ipu-mir-34b MI0024623 - None None -
cbn-mir-34 MI0024959 - Cbre_Contig0 541762 541820 + -
pmi-mir-34 MI0025097 - None None -
lva-mir-34 MI0025144 - None None -
prd-mir-34 MI0025568 - KB455532.1 889249 889311 - -
bbe-mir-34h MI0026280 - None None -
efu-mir-34b MI0028575 - JH977889.1 779590 779671 + -
efu-mir-34a MI0028722 - JH977681.1 4614082 4614167 - -
efu-mir-34c MI0028730 - JH977889.1 780248 780326 + -
chi-mir-34a MI0030757 - chr16 44326265 44326371 + -
chi-mir-34b MI0030758 - chr15 21772625 21772730 + -
chi-mir-34c MI0030759 - chr15 21773345 21773446 + -
tch-mir-34a-1 MI0031168 - KB320563.1 14668166 14668231 + -
tch-mir-34c MI0031239 - KB320750.1 6083291 6083345 + -
tch-mir-34a-2 MI0031296 - KB320563.1 14669440 14669505 + -
oha-mir-34a MI0031460 - AZIM01008802.1 1748 1852 - -
oha-mir-34c MI0031461 - AZIM01001015.1 295372 295452 + -
ppa-mir-34c MI0039816 - chr11 110237509 110237563 + -



Comments or questions? Email mirbase@manchester.ac.uk