Stem-loop tch-mir-34a-1

Accession

MI0031168

Description

Tupaia chinensis tch-mir-34a-1 precursor miRNA

Sequence

73598 reads, 315.0 reads per million, 30 experiments

UGGCAGUGUCUUAGCUGGUUGUUgugagaaauagugaaggaagCAAUCAGCAAGUAUACUGCCCUa
.(((((((((((.((((((((((..................))))))))))))).))))))))...

Structure

--U        -   A          gugagaaa 
   GGCAGUGU CUU GCUGGUUGUU        u
   |||||||| ||| ||||||||||         
   CCGUCAUA GAA CGACUAACga        a
aUC        U   -          aggaagug 

Annotation confidence High

Genome context

KB320563.1: 14668166-14668231 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-34a-1

Mature tch-miR-34a-5p

• Accession: MIMAT0036510
• Description: Tupaia chinensis tch-miR-34a-5p mature miRNA
• Sequence: 1 - UGGCAGUGUCUUAGCUGGUUGUU - 23
• Evidence: experimental ; Illumina [1]

Mature tch-miR-34a-3p

• Accession: MIMAT0059032
• Description: Tupaia chinensis tch-miR-34a-3p mature miRNA
• Sequence: 44 - CAAUCAGCAAGUAUACUGCCCU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254