Stem-loop eca-mir-34a

Accession

MI0012673

Description

Equus caballus eca-mir-34a precursor miRNA

Literature search

1 open access papers mention eca-mir-34a
(3 sentences)

Sequence

40 reads, 6 reads per million, 1 experiments

UGGCAGUGUCUUAGCUGGUUGUugugaguaauagugcgggaagcaaucagcaaguauacugcc
.(((((((((((.((((((((((....(((....)))....))))))))))))).))))))))

Structure

U        -   A          guga   a 
 GGCAGUGU CUU GCUGGUUGUu    gua u
 |||||||| ||| ||||||||||    |||  
 ccgucaua gaa cgacuaacga    cgu a
-        u   -          aggg   g 

Annotation confidence Not enough data

Genome context

chr2: 41934533-41934595 [+]

Mature eca-miR-34a

• Accession: MIMAT0012917
• Description: Equus caballus eca-miR-34a mature miRNA
• Sequence: 1 - UGGCAGUGUCUUAGCUGGUUGU - 22
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131