Stem-loop dps-mir-34

Accession

MI0001317

Description

Drosophila pseudoobscura dps-mir-34 precursor miRNA

Literature search

1 open access papers mention dps-mir-34
(12 sentences)

Sequence

3126779 reads, 18813.0 reads per million, 22 experiments

aauuggcuaugcgcuuUGGCAGUGUGGUUAGCUGGUUGuguagccaaaauauugccuuugaccauucaCAGCCACUAUCUUCACUGCCGCCgcgacaagc
.....(((.(((((..((((((((.((.(((.((((((((..(.((((........)))).)....))))))))))).)).))))))))..))).)))))

Structure

aauug   a  -   uu        U  U   C        --ua c    aua 
     gcu ug cgc  UGGCAGUG GG UAG UGGUUGug    g caaa   u
     ||| || |||  |||||||| || ||| ||||||||    | ||||    
     cga ac gcg  GCCGUCAC UC AUC ACCGACac    c guuu   u
-----   -  a   CC        U  U   -        uuac a    ccg 

Annotation confidence High

Genome context

ref|NC_046679.1|: 5315193-5315292 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dps-mir-34

Mature dps-miR-34-5p

• Accession: MIMAT0001223
• Description: Drosophila pseudoobscura dps-miR-34-5p mature miRNA
• Sequence: 17 - UGGCAGUGUGGUUAGCUGGUUG - 38
• Evidence: not_experimental

Mature dps-miR-34-3p

• Accession: MIMAT0053381
• Description: Drosophila pseudoobscura dps-miR-34-3p mature miRNA
• Sequence: 69 - CAGCCACUAUCUUCACUGCCGCC - 91
• Evidence: not_experimental

References