Stem-loop ggo-mir-34b

Accession

MI0020773

Description

Gorilla gorilla ggo-mir-34b precursor miRNA

Sequence

gugcccggugcucgguuuguAGGCAGUGUCAUUAGCUGAUUGuacuguggugguuacaaucacuaacuccacugccaucaaaacaaggcacagcaucaccgccgcccggc
((((...(((((..((((...(((((((...((((.((((((((((.....)).))))))))))))...)))))))....))))..))))).))))....(((....)))

Structure

--------------    ccg     cg    -guA       UCA    C        -  g 
              gugc   gugcu  guuu    GGCAGUG   UUAG UGAUUGua cu u
              ||||   |||||  ||||    |||||||   |||| |||||||| || g
              uacg   cacgg  caaa    ccgucac   aauc acuaacau gg g
cggcccgccgccac    --a     aa    acua       cuc    -        u  u 

Annotation confidence Not enough data

Genome context

chr11: 111454504-111454613 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-34b

Mature ggo-miR-34b

• Accession: MIMAT0024226
• Description: Gorilla gorilla ggo-miR-34b mature miRNA
• Sequence: 21 - AGGCAGUGUCAUUAGCUGAUUG - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116