Stem-loop mml-mir-34c

Accession

MI0007605

Description

Macaca mulatta mml-mir-34c precursor miRNA mir-34

Gene
family

RF00456; mir-34

Literature search

1 open access papers mention mml-mir-34c
(18 sentences)

Sequence

739869 reads, 41936 reads per million, 8 experiments

agucuaguuaccAGGCAGUGUAGUUAGCUGAUUGCugauaguaccAAUCACUAACCACACGGCCAGGuaaaaagauu
.((((..(((((.(((.((((.(((((.((((((.((....)).))))))))))).)))).))).)))))..)))).

Structure

a    ag     A   A    A     C      C  a 
 gucu  uuacc GGC GUGU GUUAG UGAUUG ug u
 ||||  ||||| ||| |||| ||||| |||||| ||  
 uaga  aauGG CCG CACA CAAUC ACUAAc au a
u    aa     A   G    C     -      c  g 

Annotation confidence High

Genome context

chr14: 104382905-104382981 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-34c

Mature mml-miR-34c-5p

• Accession: MIMAT0006175
• Description: Macaca mulatta mml-miR-34c-5p mature miRNA
• Sequence: 13 - AGGCAGUGUAGUUAGCUGAUUGC - 35
• Evidence: not_experimental

Mature mml-miR-34c-3p

• Accession: MIMAT0006176
• Description: Macaca mulatta mml-miR-34c-3p mature miRNA
• Sequence: 46 - AAUCACUAACCACACGGCCAGG - 67
• Evidence: not_experimental

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8