Stem-loop xtr-mir-34b-1

Accession

MI0004925

Description

Xenopus tropicalis xtr-mir-34b-1 precursor miRNA

Sequence

610 reads, 43.0 reads per million, 4 experiments

uguuggguuuuCAGGCAGUGUAGUUAGCUGAUUGuguuaacauaagacuugcaaucacuagcuaaacuaccagcaaaacuaaaca
((((.(((((((.((.(((.(((((((.((((((((((.......)))..)))))))))))))).))).)).).)))))).))))

Structure

    g      - A  C   G       C       --   aa 
uguu gguuuu C GG AGU UAGUUAG UGAUUGu  guu  c
|||| |||||| | || ||| ||||||| |||||||  |||  a
acaa ucaaaa g cc uca aucgauc acuaacg  cag  u
    a      c a  a   a       -       uu   aa 

Annotation confidence Not enough data

Genome context

7: 84097612-84097696 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from xtr-mir-34b-1

Mature xtr-miR-34b-5p

• Accession: MIMAT0003579
• Description: Xenopus tropicalis xtr-miR-34b-5p mature miRNA
• Sequence: 12 - CAGGCAGUGUAGUUAGCUGAUUG - 34
• Evidence: not_experimental

References