Stem-loop efu-mir-34a

Accession

MI0028722

Description

Eptesicus fuscus efu-mir-34a precursor miRNA

Sequence

16052 reads, 169.0 reads per million, 8 experiments

gguguuucuuUGGCAGUGUCUUAGCUGGUUGUUGugagucauaaugagggaagCAAUCAGCAAGUAUACUGCCCUagaaaugcugc
(((((((((..(((((((((((.((((((((((.....(((...)))....))))))))))))).))))))))..)))))))))..

Structure

--         uU        -   A          Gugag   u 
  gguguuucu  GGCAGUGU CUU GCUGGUUGUU     uca  
  |||||||||  |||||||| ||| ||||||||||     ||| a
  ucguaaaga  CCGUCAUA GAA CGACUAACga     agu  
cg         UC        U   -          -aggg   a 

Annotation confidence High

Genome context

JH977681.1: 4614082-4614167 [-]

Mature efu-miR-34a-5p

• Accession: MIMAT0035037
• Description: Eptesicus fuscus efu-miR-34a-5p mature miRNA
• Sequence: 11 - UGGCAGUGUCUUAGCUGGUUGUUG - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-34a-3p

• Accession: MIMAT0058825
• Description: Eptesicus fuscus efu-miR-34a-3p mature miRNA
• Sequence: 54 - CAAUCAGCAAGUAUACUGCCCU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545