Accession
MI0005068
Description
Bos taurus
bta-mir-34c precursor miRNA mir-34
Gene
family?
family?
RF00456;
mir-34
Literature search
14 open access papers mention bta-mir-34c
(80 sentences)
(80 sentences)
Sequence
373
reads,
6
reads per million, 50 experiments
agucuaguuacuAGGCAGUGUAGUUAGCUGAUUGcuaauaauaccaaucacuaaccacacggccagguaaaaagauu
.((((..(((((.(((.((((.(((((.((((((.((....)).))))))))))).)))).))).)))))..)))).
.((((..(((((.(((.((((.(((((.((((((.((....)).))))))))))).)))).))).)))))..)))).
Structure
a ag A A A C c a gucu uuacu GGC GUGU GUUAG UGAUUG ua u |||| ||||| ||| |||| ||||| |||||| || uaga aaugg ccg caca caauc acuaac au a u aa a g c - c a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
The mature miR-34c sequence identified by Sonstegard et al [1] has an A base at position 11 of the mature miRNA, which conflicts with the draft genome sequence that has G as shown here.
Genome context
chr15: 22282382-22282458 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-34c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bta-miR-34c
| Accession | MIMAT0003854 |
| Description | Bos taurus bta-miR-34c mature miRNA |
| Sequence | 13 - AGGCAGUGUAGUUAGCUGAUUG - 34 |
| Evidence |
experimental
cloned [1], Array [2], qRT-PCR [2] |
References
|
