Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues |
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|---|---|
| PubMed ID | 17105755 |
| Authors | "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP" |
| Journal | "Physiol Genomics |
| Volume | 29 |
| Pages | 35-43 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| bta-mir-26a-2 | MI0004731 | 21998 | 5 | 55652073 | 55652156 | + | High |
| bta-mir-18b | MI0004732 | 34 | X | 17976170 | 17976244 | - | High |
| bta-mir-29a | MI0004733 | 1228 | 4 | 94636467 | 94636530 | - | High |
| bta-let-7f-2 | MI0004734 | 15341 | X | 90986550 | 90986632 | - | High |
| bta-mir-101-2 | MI0004735 | 1087 | 8 | 39689029 | 39689107 | - | High |
| bta-mir-103-1 | MI0004736 | 1346 | 20 | 312539 | 312610 | - | High |
| bta-mir-148a | MI0004737 | 20563 | 4 | 69949480 | 69949547 | + | High |
| bta-mir-151 | MI0004738 | 3084 | 14 | 3002376 | 3002444 | + | High |
| bta-mir-16b | MI0004739 | 1506 | 1 | 107073622 | 107073714 | - | High |
| bta-mir-18a | MI0004740 | 61 | 12 | 65689560 | 65689630 | + | High |
| bta-mir-20a | MI0004741 | 99 | 12 | 65689868 | 65689938 | + | High |
| bta-mir-21 | MI0004742 | 17881 | 19 | 10803472 | 10803543 | + | High |
| bta-mir-221 | MI0004743 | 1360 | X | 98126615 | 98126724 | + | High |
| bta-mir-222 | MI0004744 | 655 | X | 98125921 | 98126030 | + | High |
| bta-mir-26b | MI0004745 | 1848 | 2 | 106411186 | 106411270 | + | High |
| bta-mir-27a | MI0004746 | 1180 | 7 | 11838877 | 11838954 | + | High |
| bta-mir-30d | MI0004747 | 5195 | 14 | 7041138 | 7041207 | + | High |
| bta-mir-320a-2 | MI0004748 | 926 | 20 | 15245796 | 15245877 | + | High |
| bta-mir-484 | MI0004749 | 129 | 25 | 14083795 | 14083857 | + | - |
| bta-mir-499 | MI0004750 | 20 | 13 | 64292583 | 64292685 | + | High |
| bta-mir-99a | MI0004751 | 1583 | 1 | 20435343 | 20435423 | - | High |
| bta-mir-125a | MI0004752 | 2184 | 18 | 57689557 | 57689642 | + | High |
| bta-mir-125b-1 | MI0004753 | 1129 | 15 | 32763901 | 32763988 | - | High |
| bta-mir-126 | MI0004754 | 6131 | 11 | 104085473 | 104085545 | + | High |
| bta-mir-128a | MI0004755 | 195 | 2 | 61675775 | 61675856 | - | High |
| bta-mir-145 | MI0004756 | 2141 | 7 | 60813550 | 60813637 | + | High |
| bta-mir-181a-2 | MI0004757 | 8671 | 11 | 95708973 | 95709082 | + | High |
| bta-mir-199a-1 | MI0004758 | 3207 | 16 | 39625344 | 39625447 | - | High |
| bta-mir-205 | MI0004759 | 4313 | 16 | 73900707 | 73900775 | - | High |
| bta-mir-27b | MI0004760 | 20982 | 8 | 81617240 | 81617336 | + | High |
| bta-mir-30b | MI0004761 | 888 | 14 | 7045567 | 7045654 | + | High |
| bta-mir-31 | MI0004762 | 364 | 8 | 22502362 | 22502455 | + | High |
| bta-mir-34b | MI0004763 | 11 | 15 | 21816728 | 21816811 | + | High |
| bta-mir-106a | MI0005005 | 46 | X | 17976329 | 17976409 | - | High |
| bta-mir-107 | MI0005006 | 756 | 26 | 11256209 | 11256289 | - | High |
| bta-mir-10a | MI0005007 | 29380 | 19 | 37912303 | 37912411 | + | High |
| bta-mir-127 | MI0005008 | 7470 | 21 | 65780691 | 65780785 | + | High |
| bta-mir-139 | MI0005009 | 52 | 15 | 52174693 | 52174760 | - | High |
| bta-mir-140 | MI0005010 | 2906 | 18 | 36962013 | 36962106 | + | High |
| bta-mir-142 | MI0005011 | 4912 | 19 | 9301432 | 9301518 | - | High |
| bta-mir-15b | MI0005012 | 173 | 1 | 107073765 | 107073862 | - | High |
| bta-mir-181b-2 | MI0005013 | 476 | 11 | 95710188 | 95710276 | + | High |
| bta-mir-193a | MI0005014 | 276 | 19 | 18474461 | 18474541 | - | High |
| bta-mir-20b | MI0005015 | 28 | X | 17975935 | 17976003 | - | High |
| bta-mir-215 | MI0005016 | 20323 | 16 | 23607646 | 23607724 | - | High |
| bta-mir-218-2 | MI0005017 | 52 | 20 | 554570 | 554631 | - | Medium |
| bta-mir-30e | MI0005018 | 4607 | 3 | 105460880 | 105460971 | - | High |
| bta-mir-345 | MI0005019 | 139 | 21 | 65217711 | 65217801 | + | High |
| bta-mir-369 | MI0005020 | 78 | 21 | 65954188 | 65954256 | + | High |
| bta-mir-380 | MI0005021 | 80 | 21 | 65915440 | 65915500 | + | High |
| bta-mir-487a | MI0005022 | 9 | 21 | 65940511 | 65940590 | + | High |
| bta-mir-545 | MI0005023 | 27 | X | 76853198 | 76853303 | + | High |
| bta-mir-92a-2 | MI0005024 | 4598 | X | 17975659 | 17975726 | - | High |
| bta-mir-98 | MI0005025 | 634 | X | 90985646 | 90985764 | - | High |
| bta-let-7d | MI0005026 | 807 | 8 | 85452957 | 85453043 | + | High |
| bta-mir-124a-1 | MI0005027 | 13 | 8 | 9301909 | 9301993 | + | High |
| bta-mir-132 | MI0005028 | 58 | 19 | 23070707 | 23070807 | - | High |
| bta-mir-138-2 | MI0005029 | 47 | 18 | 24910574 | 24910656 | + | - |
| bta-mir-148b | MI0005030 | 279 | 5 | 25734105 | 25734194 | - | High |
| bta-mir-17 | MI0005031 | 256 | 12 | 65689417 | 65689500 | + | High |
| bta-mir-181c | MI0005032 | 403 | 7 | 11811457 | 11811553 | - | High |
| bta-mir-186 | MI0005033 | 6446 | 3 | 74160334 | 74160419 | + | High |
| bta-mir-191 | MI0005034 | 11800 | 22 | 50970980 | 50971070 | + | High |
| bta-mir-192 | MI0005035 | 91717 | 29 | 43114348 | 43114453 | - | High |
| bta-mir-199b | MI0005036 | 3339 | 11 | 98855737 | 98855836 | - | High |
| bta-mir-200a | MI0005037 | 1139 | 16 | 51322680 | 51322765 | - | High |
| bta-mir-200c | MI0005038 | 381 | 5 | 103499257 | 103499321 | - | High |
| bta-mir-210 | MI0005039 | 101 | 29 | 50729070 | 50729167 | + | High |
| bta-mir-214 | MI0005040 | 95 | 16 | 39619549 | 39619658 | - | High |
| bta-mir-22 | MI0005041 | 17980 | 19 | 22811568 | 22811652 | - | High |
| bta-mir-23a | MI0005042 | 466 | 7 | 11838703 | 11838775 | + | High |
| bta-mir-29b-2 | MI0005043 | 379 | 16 | 75577046 | 75577126 | + | High |
| bta-mir-29c | MI0005044 | 719 | 16 | 75577606 | 75577693 | + | High |
| bta-mir-361 | MI0005045 | 458 | X | 66328068 | 66328138 | + | High |
| bta-mir-423 | MI0005046 | 2314 | 19 | 21238007 | 21238100 | + | High |
| bta-mir-425 | MI0005047 | 307 | 22 | 50971462 | 50971548 | + | High |
| bta-mir-450a-2 | MI0005048 | 57 | X | 18236527 | 18236618 | - | High |
| bta-mir-455 | MI0005049 | 95 | 8 | 103437398 | 103437486 | + | Medium |
| bta-mir-93 | MI0005050 | 618 | 25 | 36355766 | 36355842 | + | High |
| bta-let-7g | MI0005051 | 2040 | 22 | 48636407 | 48636489 | + | High |
| bta-mir-10b | MI0005052 | 37824 | 2 | 20762743 | 20762841 | - | High |
| bta-mir-24-2 | MI0005053 | 562 | 7 | 11839032 | 11839103 | + | High |
| bta-mir-30a | MI0005054 | 28347 | 9 | 10532171 | 10532237 | - | High |
| bta-mir-200b | MI0005055 | 309 | 16 | 51323348 | 51323406 | - | High |
| bta-mir-7-3 | MI0005056 | 93 | 7 | 19372417 | 19372498 | - | - |
| bta-let-7a-1 | MI0005057 | 11865 | 8 | 85450397 | 85450476 | + | High |
| bta-mir-150 | MI0005058 | 182 | 18 | 55954104 | 55954203 | - | High |
| bta-mir-342 | MI0005059 | 354 | 21 | 65057646 | 65057739 | + | Medium |
| bta-mir-487b | MI0005060 | 42 | 21 | 65934193 | 65934276 | + | High |
| bta-mir-532 | MI0005061 | 243 | X | 87724730 | 87724815 | + | High |
| bta-let-7f-1 | MI0005062 | 15133 | 8 | 85450750 | 85450836 | + | High |
| bta-mir-122 | MI0005063 | 143 | 24 | 57588139 | 57588223 | + | High |
| bta-mir-30c | MI0005064 | 828 | 3 | 105457746 | 105457850 | - | High |
| bta-let-7i | MI0005065 | 3806 | 5 | 50983054 | 50983137 | - | High |
| bta-mir-23b | MI0005066 | 1056 | 8 | 81617032 | 81617091 | + | High |
| bta-mir-25 | MI0005067 | 2527 | 25 | 36355966 | 36356049 | + | High |
| bta-mir-34c | MI0005068 | 18 | 15 | 21817429 | 21817505 | + | High |
| bta-mir-363 | MI0005069 | 170 | X | 17975504 | 17975577 | - | High |
| bta-mir-124a-2 | MI0009725 | 13 | 14 | 29124356 | 29124466 | + | High |
| bta-mir-124b | MI0009726 | 13 | 13 | 54355340 | 54355426 | - | High |
| bta-mir-199a-2 | MI0009770 | 3202 | 7 | 15283412 | 15283482 | - | High |
| bta-mir-218-1 | MI0009780 | 65 | 6 | 40087130 | 40087239 | + | Medium |
| bta-mir-29b-1 | MI0010464 | 359 | 4 | 94636842 | 94636922 | - | High |
| bta-mir-181b-1 | MI0010485 | 463 | 16 | 77762664 | 77762773 | - | High |