Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues |
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PubMed ID | 17105755 |
Authors | "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP" |
Journal | "Physiol Genomics |
Volume | 29 |
Pages | 35-43 |
Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
---|---|---|---|---|---|---|---|
bta-mir-26a-2 | MI0004731 | 21998 | chr5 | 56156321 | 56156404 | + | High |
bta-mir-18b | MI0004732 | 34 | chrX | 18021698 | 18021772 | - | High |
bta-mir-29a | MI0004733 | 1228 | chr4 | 95726868 | 95726931 | - | High |
bta-let-7f-2 | MI0004734 | 15341 | chrX | 97466644 | 97466726 | - | High |
bta-mir-101-2 | MI0004735 | 1087 | chr8 | 40067392 | 40067470 | - | - |
bta-mir-103-1 | MI0004736 | 1346 | chr20 | 189696 | 189767 | - | - |
bta-mir-148a | MI0004737 | 20563 | chr4 | 70663557 | 70663624 | + | High |
bta-mir-151 | MI0004738 | 3084 | chr14 | 4090080 | 4090148 | + | High |
bta-mir-16b | MI0004739 | 1506 | chr1 | 108321598 | 108321690 | - | - |
bta-mir-18a | MI0004740 | 61 | chr12 | 66421379 | 66421449 | + | High |
bta-mir-20a | MI0004741 | 99 | chr12 | 66421687 | 66421757 | + | High |
bta-mir-21 | MI0004742 | 17881 | chr19 | 11138471 | 11138542 | + | High |
bta-mir-221 | MI0004743 | 1360 | chrX | 104688654 | 104688763 | + | - |
bta-mir-222 | MI0004744 | 655 | chrX | 104687960 | 104688069 | + | - |
bta-mir-26b | MI0004745 | 1848 | chr2 | 107511785 | 107511869 | + | High |
bta-mir-27a | MI0004746 | 1180 | chr7 | 13046007 | 13046084 | - | High |
bta-mir-30d | MI0004747 | 5195 | chr14 | 8141427 | 8141496 | + | High |
bta-mir-320a-2 | MI0004748 | 926 | chr20 | 15289880 | 15289961 | + | - |
bta-mir-484 | MI0004749 | 129 | chr25 | 14245864 | 14245926 | + | - |
bta-mir-499 | MI0004750 | 20 | chr13 | 65163834 | 65163936 | + | - |
bta-mir-99a | MI0004751 | 1583 | chr1 | 19985570 | 19985650 | - | High |
bta-mir-125a | MI0004752 | 2184 | chr18 | 58267247 | 58267332 | + | High |
bta-mir-125b-1 | MI0004753 | 1129 | chr15 | 33484663 | 33484750 | - | High |
bta-mir-126 | MI0004754 | 6131 | chr11 | 104385546 | 104385618 | + | High |
bta-mir-128-1 | MI0004755 | 195 | chr2 | 62228129 | 62228210 | - | High |
bta-mir-145 | MI0004756 | 2141 | chr7 | 63080500 | 63080587 | + | High |
bta-mir-181a-2 | MI0004757 | 8671 | chr11 | 95966066 | 95966175 | + | - |
bta-mir-199a-1 | MI0004758 | 3207 | chr16 | 40646156 | 40646259 | - | High |
bta-mir-205 | MI0004759 | 4313 | chr16 | 76053046 | 76053114 | - | High |
bta-mir-27b | MI0004760 | 20982 | chr8 | 83483816 | 83483912 | + | High |
bta-mir-30b | MI0004761 | 888 | chr14 | 8145856 | 8145943 | + | High |
bta-mir-31 | MI0004762 | 364 | chr8 | 22619494 | 22619587 | + | High |
bta-mir-34b | MI0004763 | 11 | chr15 | 22281681 | 22281764 | + | High |
bta-mir-106a | MI0005005 | 46 | chrX | 18021857 | 18021937 | - | - |
bta-mir-107 | MI0005006 | 756 | chr26 | 11348565 | 11348645 | - | High |
bta-mir-10a | MI0005007 | 29380 | chr19 | 38713901 | 38714009 | + | High |
bta-mir-127 | MI0005008 | 7470 | chr21 | 67708504 | 67708598 | + | High |
bta-mir-139 | MI0005009 | 52 | chr15 | 53212535 | 53212602 | - | High |
bta-mir-140 | MI0005010 | 2906 | chr18 | 37196457 | 37196550 | + | High |
bta-mir-142 | MI0005011 | 4912 | chr19 | 9627413 | 9627499 | - | - |
bta-mir-15b | MI0005012 | 173 | chr1 | 108321741 | 108321838 | - | High |
bta-mir-181b-2 | MI0005013 | 476 | chr11 | 95967281 | 95967369 | + | - |
bta-mir-193a | MI0005014 | 276 | chr19 | 18931346 | 18931426 | - | High |
bta-mir-20b | MI0005015 | 28 | chrX | 18021463 | 18021531 | - | - |
bta-mir-215 | MI0005016 | 20323 | chr16 | 24404933 | 24405011 | - | High |
bta-mir-218-2 | MI0005017 | 52 | chr20 | 443261 | 443322 | - | - |
bta-mir-30e | MI0005018 | 4607 | chr3 | 106453038 | 106453129 | - | High |
bta-mir-345 | MI0005019 | 139 | chr21 | 67146236 | 67146326 | + | High |
bta-mir-369 | MI0005020 | 78 | chr21 | 67881914 | 67881982 | + | High |
bta-mir-380 | MI0005021 | 80 | chr21 | 67843176 | 67843236 | + | - |
bta-mir-487a | MI0005022 | 9 | chr21 | 67868237 | 67868316 | + | High |
bta-mir-545 | MI0005023 | 27 | chrX | 82917716 | 82917821 | + | High |
bta-mir-92a-2 | MI0005024 | 4598 | chrX | 18021187 | 18021254 | - | - |
bta-mir-98 | MI0005025 | 634 | chrX | 97465740 | 97465858 | - | High |
bta-let-7d | MI0005026 | 807 | chr8 | 87366413 | 87366499 | + | High |
bta-mir-124a-1 | MI0005027 | 13 | chr8 | 9221497 | 9221581 | + | - |
bta-mir-132 | MI0005028 | 58 | chr19 | 23783488 | 23783588 | - | High |
bta-mir-138-2 | MI0005029 | 47 | chr18 | 25049218 | 25049300 | + | High |
bta-mir-148b | MI0005030 | 279 | chr5 | 25896187 | 25896276 | - | High |
bta-mir-17 | MI0005031 | 256 | chr12 | 66421236 | 66421319 | + | High |
bta-mir-181c | MI0005032 | 403 | chr7 | 12978745 | 12978841 | + | High |
bta-mir-186 | MI0005033 | 6446 | chr3 | 74749203 | 74749288 | + | High |
bta-mir-191 | MI0005034 | 11800 | chr22 | 51727524 | 51727614 | + | High |
bta-mir-192 | MI0005035 | 91717 | chr29 | 44018495 | 44018600 | + | High |
bta-mir-199b | MI0005036 | 3339 | chr11 | 99127762 | 99127861 | - | High |
bta-mir-200a | MI0005037 | 1139 | chr16 | 52694578 | 52694663 | - | High |
bta-mir-200c | MI0005038 | 381 | chr5 | 104150173 | 104150237 | - | High |
bta-mir-210 | MI0005039 | 101 | chr29 | 51369011 | 51369108 | + | High |
bta-mir-214 | MI0005040 | 95 | chr16 | 40640361 | 40640470 | - | High |
bta-mir-22 | MI0005041 | 17980 | chr19 | 23514297 | 23514381 | - | High |
bta-mir-23a | MI0005042 | 466 | chr7 | 13046186 | 13046258 | - | - |
bta-mir-29b-2 | MI0005043 | 379 | chr16 | 77732601 | 77732681 | + | High |
bta-mir-29c | MI0005044 | 719 | chr16 | 77733161 | 77733248 | + | - |
bta-mir-361 | MI0005045 | 458 | chrX | 75231068 | 75231138 | + | - |
bta-mir-423 | MI0005046 | 2314 | chr19 | 21923268 | 21923361 | + | High |
bta-mir-425 | MI0005047 | 307 | chr22 | 51728006 | 51728092 | + | High |
bta-mir-450a-2 | MI0005048 | 57 | chrX | 18282193 | 18282284 | - | - |
bta-mir-455 | MI0005049 | 95 | chr8 | 105738159 | 105738247 | + | High |
bta-mir-93 | MI0005050 | 618 | chr25 | 37072517 | 37072593 | + | High |
bta-let-7g | MI0005051 | 2040 | chr22 | 49372363 | 49372445 | + | High |
bta-mir-10b | MI0005052 | 37824 | chr2 | 20876466 | 20876564 | - | - |
bta-mir-24-2 | MI0005053 | 562 | chr7 | 13045858 | 13045929 | - | High |
bta-mir-30a | MI0005054 | 28347 | chr9 | 10818870 | 10818936 | - | - |
bta-mir-200b | MI0005055 | 309 | chr16 | 52695246 | 52695304 | - | High |
bta-mir-7-3 | MI0005056 | 93 | chr7 | 20670457 | 20670538 | - | - |
bta-let-7a-1 | MI0005057 | 11865 | chr8 | 87363854 | 87363933 | + | High |
bta-mir-150 | MI0005058 | 182 | chr18 | 56646623 | 56646722 | - | - |
bta-mir-342 | MI0005059 | 354 | chr21 | 66986215 | 66986308 | + | High |
bta-mir-487b | MI0005060 | 42 | chr21 | 67861931 | 67862014 | + | - |
bta-mir-532 | MI0005061 | 243 | chrX | 93935413 | 93935498 | + | High |
bta-let-7f-1 | MI0005062 | 15133 | chr8 | 87364207 | 87364293 | + | High |
bta-mir-122 | MI0005063 | 143 | chr24 | 58263337 | 58263421 | + | - |
bta-mir-30c | MI0005064 | 828 | chr3 | 106449904 | 106450008 | - | High |
bta-let-7i | MI0005065 | 3806 | chr5 | 51387456 | 51387539 | - | High |
bta-mir-23b | MI0005066 | 1056 | None | None | High | ||
bta-mir-25 | MI0005067 | 2527 | chr25 | 37072717 | 37072800 | + | High |
bta-mir-34c | MI0005068 | 18 | chr15 | 22282382 | 22282458 | + | - |
bta-mir-363 | MI0005069 | 170 | chrX | 18021032 | 18021105 | - | High |
bta-mir-124a-2 | MI0009725 | 13 | chr14 | 31015073 | 31015183 | + | - |
bta-mir-124b | MI0009726 | 13 | chr13 | 55046824 | 55046910 | - | - |
bta-mir-199a-2 | MI0009770 | 3202 | chr7 | 16580964 | 16581034 | - | High |
bta-mir-218-1 | MI0009780 | 65 | chr6 | 41756487 | 41756596 | + | - |
bta-mir-29b-1 | MI0010464 | 359 | chr4 | 95727243 | 95727323 | - | - |
bta-mir-181b-1 | MI0010485 | 463 | chr16 | 79940310 | 79940419 | - | - |