Stem-loop bta-mir-487a

Accession

MI0005022

Description

Bos taurus bta-mir-487a precursor miRNA

Literature search

11 open access papers mention bta-mir-487a
(17 sentences)

Sequence

30306 reads, 17.0 reads per million, 292 experiments

gguacuugaagaGUGGUUAUCCCUGCUGUGUUCGcuguauuuaugacgAAUCAUACAGGGACAUCCAGUUUuucaguauc
((((((.(((((.(((...((((((.(((((((((.........).)))).))))))))))...))).))))).))))))

Structure

      u     G   UUA      C    -    - ugu 
gguacu gaaga UGG   UCCCUG UGUG UUCG c   a
|||||| ||||| |||   |||||| |||| |||| |   u
cuauga uuUUU ACC   AGGGAC AUAC AAgc g   u
      c     G   UAC      -    U    a uau 

Annotation confidence High

Genome context

21: 65940511-65940590 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from bta-mir-487a

Mature bta-miR-487a-5p

• Accession: MIMAT0060950
• Description: Bos taurus bta-miR-487a-5p mature miRNA
• Sequence: 13 - GUGGUUAUCCCUGCUGUGUUCG - 34
• Evidence: experimental ; cloned [1]

Mature bta-miR-487a-3p

• Accession: MIMAT0003805
• Description: Bos taurus bta-miR-487a-3p mature miRNA
• Sequence: 49 - AAUCAUACAGGGACAUCCAGUUU - 71
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43