Stem-loop bta-mir-103-1

Accession

MI0004736

Description

Bos taurus bta-mir-103-1 precursor miRNA mir-103

Gene
family

RF00129; mir-103

Literature search

35 open access papers mention bta-mir-103-1
(234 sentences)

Sequence

16118663 reads, 4269.0 reads per million, 321 experiments

cugcccucGGCUUCUUUACAGUGCUGCCUUGuugcauauggaucaAGCAGCAUUGUACAGGGCUAUGAaggc
..(((.((((((.((.(((((((((((.(((.(.(....).).)))))))))))))).))))))..)).)))

Structure

cu   c  --    U  U           C   u g a 
  gcc uc  GGCU CU UACAGUGCUGC UUG u c u
  ||| ||  |||| || ||||||||||| ||| | |  
  cgg AG  UCGG GA AUGUUACGACG Aac a g a
--   a  UA    -  C           -   u g u 

Annotation confidence High

Genome context

20: 312539-312610 [-]

Mature bta-miR-103-1-5p

• Accession: MIMAT0050775
• Description: Bos taurus bta-miR-103-1-5p mature miRNA
• Sequence: 9 - GGCUUCUUUACAGUGCUGCCUUG - 31
• Evidence: experimental ; cloned [1]

Mature bta-miR-103-3p

• Accession: MIMAT0003521
• Description: Bos taurus bta-miR-103-3p mature miRNA
• Sequence: 46 - AGCAGCAUUGUACAGGGCUAUGA - 68
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988