Stem-loop bta-mir-210

Accession

MI0005039

Description

Bos taurus bta-mir-210 precursor miRNA

Literature search

168 open access papers mention bta-mir-210
(999 sentences)

Sequence

524966 reads, 196.0 reads per million, 319 experiments

ccuccaggcgcagggcAGCCACUGCCCACCGCACACUGcgcugcuccggacccACUGUGCGUGUGACAGCGGCUGAUcugucccugggcagcgcgacc
..((((((.((((..(((((.(((..(((((((((.((.((((...))).).)).)))))).))).))).)))))..)))).))))))..........

Structure

--------cc      c    gg     A   CC   -      C  c -   c 
          uccagg gcag  cAGCC CUG  CAC CGCACA UG g cug  
          |||||| ||||  ||||| |||  ||| |||||| || | ||| u
          gggucc uguc  GUCGG GAC  GUG GCGUGU Ac c ggc  
ccagcgcgac      c    UA     C   -A   U      C  c a   c 

Annotation confidence High

Genome context

29: 50729070-50729167 [+]

Mature bta-miR-210-5p

• Accession: MIMAT0060961
• Description: Bos taurus bta-miR-210-5p mature miRNA
• Sequence: 17 - AGCCACUGCCCACCGCACACUG - 38
• Evidence: experimental ; cloned [1-2]

Mature bta-miR-210-3p

• Accession: MIMAT0003824
• Description: Bos taurus bta-miR-210-3p mature miRNA
• Sequence: 54 - ACUGUGCGUGUGACAGCGGCUGAU - 77
• Evidence: experimental ; cloned [1-2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988