Stem-loop bta-mir-18b

Accession

MI0004732

Description

Bos taurus bta-mir-18b precursor miRNA

Literature search

2 open access papers mention bta-mir-18b
(3 sentences)

Sequence

445 reads, 8 reads per million, 56 experiments

cuuguguUAAGGUGCAUCUAGUGCAGUUAgugaagcagcucagaaucuacugcccuaaaugcuccuucuggcaca
..((((((((((.((((.(((.(((((...(((......)))......))))).))).)))).)))..)))))))

Structure

cu       --   U    C   U     ---UAg   ag 
  uguguUA  AGG GCAU UAG GCAGU      uga  c
  |||||||  ||| |||| ||| |||||      |||   
  acacggu  ucc cgua auc cguca      acu  a
--       cu   u    a   c     ucuaag   cg 

Annotation confidence High

Genome context

chrX: 18021698-18021772 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from bta-mir-18b

Mature bta-miR-18b

• Accession: MIMAT0003517
• Description: Bos taurus bta-miR-18b mature miRNA
• Sequence: 8 - UAAGGUGCAUCUAGUGCAGUUA - 29
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43