Accession
MI0005063
Description
Bos taurus
bta-mir-122 precursor miRNA mir-122
Gene
family?
family?
RF00684;
mir-122
Literature search
267 open access papers mention bta-mir-122
(1335 sentences)
(1335 sentences)
Sequence
19801029
reads,
21536.0
reads per million, 252 experiments
ccuuagcagagcugUGGAGUGUGACAAUGGUGUUUGuguccaaacuaucaAACGCCAUUAUCACACUAAAUAGcuacuguuaggc
.((((((((((((((..(((((((.(((((((((((............))))))))))).)))))))..)))))).)))))))).
.((((((((((((((..(((((((.(((((((((((............))))))))))).)))))))..)))))).)))))))).
Structure
c - GG C ugucc cuuagcag agcugU AGUGUGA AAUGGUGUUUG a |||||||| |||||| ||||||| ||||||||||| ggauuguc ucGAUA UCACACU UUACCGCAAac a c a AA A uauca
Annotation confidence
High
Do you think this miRNA is real?
Comments
The mature miR-122 sequence identified by Sonstegard et al [1] has an additional C base at the 5' end, which conflicts with the draft genome sequence.
Genome context
24: 57588139-57588223 [+]
Database links
Mature bta-miR-122-5p
| Accession | MIMAT0003849 |
| Description | Bos taurus bta-miR-122-5p mature miRNA |
| Sequence | 15 - UGGAGUGUGACAAUGGUGUUUG - 36 |
| Evidence |
experimental
cloned [1,3], Array [2], qRT-PCR [2] |
Mature bta-miR-122-3p
| Accession | MIMAT0050799 |
| Description | Bos taurus bta-miR-122-3p mature miRNA |
| Sequence | 51 - AACGCCAUUAUCACACUAAAUAG - 73 |
| Evidence |
experimental
cloned [1,3], Array [2], qRT-PCR [2] |
References
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