Stem-loop bta-mir-455

Accession

MI0005049

Description

Bos taurus bta-mir-455 precursor miRNA mir-455

Gene
family

RF00709; mir-455

Literature search

7 open access papers mention bta-mir-455
(22 sentences)

Sequence

4623 reads, 95 reads per million, 66 experiments

ucccuggcgugagggUAUGUGCCUUUGGACUACAUCguggaagccagcaccauGCAGUCCAUGGGCAUAUACACUugccucaaggccua
.....(((.(((((((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).....)))))..)))..

Structure

ucccu   -g     -----          U      A   C   gaa 
     ggc  ugagg     gUAUGUGCCU UGGACU CAU gug   g
     |||  |||||     |||||||||| |||||| ||| |||    
     ccg  acucc     CAUAUACGGG ACCUGA Gua cac   c
---au   ga     guUCA          U      C   c   gac 

Annotation confidence High

Genome context

chr8: 105738159-105738247 [+]

Mature bta-miR-455-5p

• Accession: MIMAT0003835
• Description: Bos taurus bta-miR-455-5p mature miRNA
• Sequence: 16 - UAUGUGCCUUUGGACUACAUC - 36
• Evidence: not_experimental

Mature bta-miR-455-3p

• Accession: MIMAT0003836
• Description: Bos taurus bta-miR-455-3p mature miRNA
• Sequence: 54 - GCAGUCCAUGGGCAUAUACACU - 75
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43