Stem-loop bta-let-7f-2

Accession

MI0004734

Description

Bos taurus bta-let-7f-2 precursor miRNA

Literature search

66 open access papers mention bta-let-7f-2
(248 sentences)

Sequence

55609534 reads, 22763.0 reads per million, 321 experiments

ugugggaUGAGGUAGUAGAUUGUAUAGUUuuagggucauaccccaucuuggagauaaCUAUACAGUCUACUGUCUUUCccacg
.((((((.((((((((((((((((((((((((((((........))))))))....)))))))))))))))))))))))))).

Structure

u      U                    ----        cau 
 guggga GAGGUAGUAGAUUGUAUAGU    Uuuagggu   a
 |||||| ||||||||||||||||||||    ||||||||    
 caccCU UUCUGUCAUCUGACAUAUCa    agguucua   c
g      -                    auag        ccc 

Annotation confidence High

Genome context

X: 90986550-90986632 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-let-7f-2

Mature bta-let-7f-5p

• Accession: MIMAT0003519
• Description: Bos taurus bta-let-7f-5p mature miRNA
• Sequence: 8 - UGAGGUAGUAGAUUGUAUAGUU - 29
• Evidence: experimental ; cloned [1-3]

Mature bta-let-7f-2-3p

• Accession: MIMAT0060919
• Description: Bos taurus bta-let-7f-2-3p mature miRNA
• Sequence: 58 - CUAUACAGUCUACUGUCUUUC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988


3. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343