Accession
MI0005067
Description
Bos taurus
bta-mir-25 precursor miRNA
Literature search
127 open access papers mention bta-mir-25
(523 sentences)
(523 sentences)
Sequence
20127531
reads,
5560.0
reads per million, 321 experiments
ggccaguguugagAGGCGGAGACUUGGGCAAUUGCUggacgcugccccgggCAUUGCACUUGUCUCGGUCUGAcagugccggcc
((((.((((((..((((.(((((..(.(((((..((((........))))..))))).)..))))).))))..)))))).))))
((((.((((((..((((.(((((..(.(((((..((((........))))..))))).)..))))).))))..)))))).))))
Structure
a ag G UU G UG acg
ggcc guguug AGGC GAGAC G GCAAU CUgg c
|||| |||||| |||| ||||| | ||||| ||||
ccgg cgugac UCUG CUCUG C CGUUA ggcc u
c AG G UU A Cg ccg
Annotation confidence
High
Do you think this miRNA is real?
Comments
The mature miR-25 sequence identified by Coutinho et al [1] has an additional A base at the 5' end, which conflicts with the draft genome sequence.
Genome context
25: 36355966-36356049 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from bta-mir-25
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bta-miR-25-5p
| Accession | MIMAT0060970 |
| Description | Bos taurus bta-miR-25-5p mature miRNA |
| Sequence | 14 - AGGCGGAGACUUGGGCAAUUGCU - 36 |
| Evidence |
experimental
cloned [1-2], Array [3], qRT-PCR [3] |
Mature bta-miR-25-3p
| Accession | MIMAT0003853 |
| Description | Bos taurus bta-miR-25-3p mature miRNA |
| Sequence | 52 - CAUUGCACUUGUCUCGGUCUGA - 73 |
| Evidence |
experimental
cloned [1-2], Array [3], qRT-PCR [3] |
References
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