Stem-loop bta-mir-124a-1

Accession

MI0005027

Description

Bos taurus bta-mir-124a-1 precursor miRNA

Literature search

8 open access papers mention bta-mir-124a-1
(11 sentences)

Sequence

136821 reads, 534.0 reads per million, 200 experiments

aggccucucucucCGUGUUCACAGCGGACCUUGAUUuaaauguccauacaauUAAGGCACGCGGUGAAUGCCAAGaauggggcug
.((((((..(((..((((((((.(((..((((((((.............))))))))..))).))))))))..)))..)))))).

Structure

a      uc   cC        A   GA        uaaau 
 ggccuc  ucu  GUGUUCAC GCG  CCUUGAUU     g
 ||||||  |||  |||||||| |||  ||||||||     u
 ucgggg  aGA  CGUAAGUG CGC  GGAAUuaa     c
g      ua   AC        G   AC        cauac 

Annotation confidence High

Genome context

8: 9301909-9301993 [+]

Mature bta-miR-124a-5p

• Accession: MIMAT0050789
• Description: Bos taurus bta-miR-124a-5p mature miRNA
• Sequence: 14 - CGUGUUCACAGCGGACCUUGAUU - 36
• Evidence: experimental ; cloned [2,4], Array [3], qRT-PCR [3]

Mature bta-miR-124a-3p

• Accession: MIMAT0003811
• Description: Bos taurus bta-miR-124a-3p mature miRNA
• Sequence: 53 - UAAGGCACGCGGUGAAUGCCAAG - 75
• Evidence: experimental ; cloned [2,4], Array [3], qRT-PCR [3]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 19170227
   Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach
   "Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, Hoelker M"
   "Mol Reprod Dev (2009) 76:665-677


3. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90