Accession
MI0005040
Description
Bos taurus
bta-mir-214 precursor miRNA
Literature search
158 open access papers mention bta-mir-214
(936 sentences)
(936 sentences)
Sequence
483635
reads,
214.0
reads per million, 307 experiments
ggccuggcuggacggaguugucaugugucUGCCUGUCUACACUUGCUGUGCAGAacauccgcucaccugUACAGCAGGCACAGACAGGCAGUcacaugacaacccagccu
.....((((((.....(((((((((((.((((((((((...((((((((((((.............))))))))))))...)))))))))).))))))))))))))))).
.....((((((.....(((((((((((.((((((((((...((((((((((((.............))))))))))))...)))))))))).))))))))))))))))).
Structure
ggccu acgga u ACA Aacau
ggcugg guugucaugug cUGCCUGUCU CUUGCUGUGCAG c
|||||| ||||||||||| |||||||||| |||||||||||| c
ccgacc caacaguacac GACGGACAGA GGACGACAUguc g
----u ----- U CAC cacuc
Annotation confidence
High
Do you think this miRNA is real?
Comments
The mature sequence shown here was cloned by Gu et al. [2] and is consistent with that identified in rat (MIR:MI0000954) and zebrafish (MIR:MI0001381). The mature product reported by Coutinho et al. is extended by two bases at the 5' end [1].
Genome context
16: 39619549-39619658 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from bta-mir-214
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bta-miR-214-5p
| Accession | MIMAT0060962 |
| Description | Bos taurus bta-miR-214-5p mature miRNA |
| Sequence | 30 - UGCCUGUCUACACUUGCUGUGCAGA - 54 |
| Evidence |
experimental
cloned [1-2], Array [3], qRT-PCR [3] |
Mature bta-miR-214-3p
| Accession | MIMAT0003825 |
| Description | Bos taurus bta-miR-214-3p mature miRNA |
| Sequence | 70 - UACAGCAGGCACAGACAGGCAGU - 92 |
| Evidence |
experimental
cloned [1-2], Array [3], qRT-PCR [3] |
References
|
