Accession
MI0005040
Description
Bos taurus
bta-mir-214 precursor miRNA
Literature search
11 open access papers mention bta-mir-214
(19 sentences)
(19 sentences)
Sequence
5946
reads,
95
reads per million, 66 experiments
ggccuggcuggacggaguugucaugugucugccugucuacacuugcugugcagaacauccgcucaccuguACAGCAGGCACAGACAGGCAGUcacaugacaacccagccu
.....((((((.....(((((((((((.((((((((((...((((((((((((.............))))))))))))...)))))))))).))))))))))))))))).
.....((((((.....(((((((((((.((((((((((...((((((((((((.............))))))))))))...)))))))))).))))))))))))))))).
Structure
ggccu acgga u aca aacau
ggcugg guugucaugug cugccugucu cuugcugugcag c
|||||| ||||||||||| |||||||||| |||||||||||| c
ccgacc caacaguacac GACGGACAGA GGACGACAuguc g
----u ----- U CAC cacuc
Annotation confidence
High
Do you think this miRNA is real?
Comments
The mature sequence shown here was cloned by Gu et al. [2] and is consistent with that identified in rat (MIR:MI0000954) and zebrafish (MIR:MI0001381). The mature product reported by Coutinho et al. is extended by two bases at the 5' end [1].
Genome context
chr16: 40640361-40640470 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from bta-mir-214
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bta-miR-214
| Accession | MIMAT0003825 |
| Description | Bos taurus bta-miR-214 mature miRNA |
| Sequence | 71 - ACAGCAGGCACAGACAGGCAGU - 92 |
| Evidence |
experimental
cloned [1-2], Array [3], qRT-PCR [3] |
References
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