Stem-loop bta-mir-106a

Accession

MI0005005

Description

Bos taurus bta-mir-106a precursor miRNA mir-17

Gene
family

RF00051; mir-17

Literature search

12 open access papers mention bta-mir-106a
(34 sentences)

Sequence

781 reads, 46 reads per million, 59 experiments

ccuuggccauguAAAAGUGCUUACAGUGCAGGUAgcuuuuugagaucuacugcaaugcaagcacuucuuacauuaccaugg
((.(((..((((((((((((((.((.(((((.(((.(((...))).)))))))).)).)))))))).))))))..))).))

Structure

  u   cc      -        A  G     G   c   u 
cc ugg  auguAA AAGUGCUU CA UGCAG UAg uuu  
|| |||  |||||| |||||||| || ||||| ||| ||| u
gg acc  uacauu uucacgaa gu acguc auc aga  
  u   au      c        c  a     -   u   g 

Annotation confidence Not enough data

Genome context

chrX: 18021857-18021937 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from bta-mir-106a

Mature bta-miR-106a

• Accession: MIMAT0003784
• Description: Bos taurus bta-miR-106a mature miRNA
• Sequence: 13 - AAAAGUGCUUACAGUGCAGGUA - 34
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43