Stem-loop bta-mir-29b-2

Accession

MI0005043

Description

Bos taurus bta-mir-29b-2 precursor miRNA

Literature search

49 open access papers mention bta-mir-29b-2
(282 sentences)

Sequence

1512415 reads, 363.0 reads per million, 317 experiments

cuucuggaagCUGGUUUCACAUGGUGGCUUAGAUuuuuccaucuuuguaucUAGCACCAUUUGAAAUCAGUGUuuuaggag
(((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).)))))))))

Structure

         -          C      G  U    uuuucc 
cuucuggaa gCUGGUUUCA AUGGUG CU AGAU      a
||||||||| |||||||||| |||||| || ||||       
gaggauuuU UGACUAAAGU UACCAC GA Ucua      u
         G          U      -  -    uguuuc 

Annotation confidence High

Genome context

16: 75577046-75577126 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from bta-mir-29b-2

Mature bta-miR-29b-2-5p

• Accession: MIMAT0060963
• Description: Bos taurus bta-miR-29b-2-5p mature miRNA
• Sequence: 11 - CUGGUUUCACAUGGUGGCUUAGAU - 34
• Evidence: experimental ; unknown

Mature bta-miR-29b-1-3p

• Accession: MIMAT0003828
• Description: Bos taurus bta-miR-29b-1-3p mature miRNA
• Sequence: 52 - UAGCACCAUUUGAAAUCAGUGU - 73
• Evidence: experimental ; cloned [1,4], Array [2], qRT-PCR [2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 19170227
   Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach
   "Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, Hoelker M"
   "Mol Reprod Dev (2009) 76:665-677