Accession
MI0005046
Description
Bos taurus
bta-mir-423 precursor miRNA mir-423
Gene
family?
family?
RF00870;
mir-423
Literature search
18 open access papers mention bta-mir-423
(61 sentences)
(61 sentences)
Sequence
113531
reads,
1475
reads per million, 78 experiments
auaaaggaaguuaggcUGAGGGGCAGAGAGCGAGACUUUucuauuuuccaaAAGCUCGGUCUGAGGCCCCUCAGUcuugcuuccuaccccgcgc
....(((((((.((((((((((((..(((.((((.(((((.........))))))))).)))...)))))))))))).))))))).........
....(((((((.((((((((((((..(((.((((.(((((.........))))))))).)))...)))))))))))).))))))).........
Structure
-----auaa u -AG G A cua
aggaagu aggcUGAGGGGC AGA CGAG CUUUu u
||||||| |||||||||||| ||| |||| ||||| u
uccuucg ucUGACUCCCCG UCU GCUC GAAaa u
cgcgcccca u GAG G - ccu
Annotation confidence
High
Do you think this miRNA is real?
Comments
High-throughput sequencing suggests that the dominant miRNA arises from the 5' arm of this precursor [3], in contrast to earlier studies.
Genome context
chr19: 21923268-21923361 [+]
Database links
Mature bta-miR-423-5p
| Accession | MIMAT0012537 |
| Description | Bos taurus bta-miR-423-5p mature miRNA |
| Sequence | 17 - UGAGGGGCAGAGAGCGAGACUUU - 39 |
| Evidence |
experimental
Illumina [3] |
Mature bta-miR-423-3p
| Accession | MIMAT0003831 |
| Description | Bos taurus bta-miR-423-3p mature miRNA |
| Sequence | 52 - AAGCUCGGUCUGAGGCCCCUCAGU - 75 |
| Evidence |
experimental
cloned [1], Array [2], qRT-PCR [2], Illumina [3] |
References
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