miRBase entry: 19633723

Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection

PubMed ID 19633723
Authors Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
Journal PLoS One
Volume 4
Pages e6349

There are 290 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
bta-mir-27a MI0004746 1180 chr7 13046007 13046084 - High
bta-mir-30b MI0004761 888 chr14 8145856 8145943 + High
bta-mir-193a MI0005014 276 chr19 18931346 18931426 - High
bta-mir-345 MI0005019 139 chr21 67146236 67146326 + High
bta-mir-423 MI0005046 2314 chr19 21923268 21923361 + High
bta-mir-23b MI0005066 1056 None None High
bta-mir-365-1 MI0005465 154 chr25 13401780 13401866 + High
bta-mir-2284i MI0011294 130 chr1 3577657 3577733 + -
bta-mir-2286 MI0011295 0 chr1 52327449 52327522 - -
bta-mir-2287 MI0011296 1 chr1 73831718 73831791 - -
bta-mir-2288 MI0011297 0 chr1 139830700 139830776 - -
bta-mir-2289 MI0011298 3 chr1 148643536 148643609 - -
bta-mir-2285a MI0011299 5 chr1 149503807 149503878 - -
bta-mir-2290 MI0011300 3 chr10 12721349 12721428 - -
bta-mir-2291 MI0011301 3 chr10 65669872 65669945 - -
bta-mir-2292 MI0011302 2 chr10 67512063 67512132 + -
bta-mir-2293 MI0011303 0 chr10 97783062 97783133 - -
bta-mir-2294 MI0011304 1 chr11 11378484 11378546 + -
bta-mir-2295 MI0011305 1 chr11 10923820 10923886 - -
bta-mir-2296 MI0011306 2 chr11 37339537 37339606 - -
bta-mir-2297 MI0011307 0 chr11 37376799 37376871 - -
bta-mir-2298 MI0011308 None chr11 88552052 88552120 + -
bta-mir-2299 MI0011309 24 chr12 29753514 29753592 - High
bta-mir-2300a MI0011310 1 chr12 31918144 31918221 - -
bta-mir-2300b MI0011311 10 chr12 31918146 31918219 + -
bta-mir-2284s MI0011312 2 chr12 53384181 53384248 + -
bta-mir-2301 MI0011313 None chr12 87232038 87232098 + -
bta-mir-2302 MI0011314 1 chr12 91086449 91086524 - -
bta-mir-2303 MI0011315 1 chr12 91471677 91471755 + -
bta-mir-2285d MI0011316 1 chr13 22978470 22978539 - -
bta-mir-2304 MI0011317 0 chr13 28897433 28897506 - -
bta-mir-2305 MI0011318 0 chr13 39974755 39974820 + -
bta-mir-2306 MI0011319 1 chr13 55593330 55593408 + -
bta-mir-2307 MI0011320 12 chr13 59731938 59732006 + -
bta-mir-2308 MI0011321 9 chr14 1612166 1612234 + -
bta-mir-2309 MI0011322 2 chr14 2115108 2115182 + -
bta-mir-2310 MI0011323 7 chr14 15081866 15081929 + -
bta-mir-1603 MI0011324 None chr14 38395434 38395504 + -
bta-mir-2284l MI0011325 0 chr14 39256496 39256568 + -
bta-mir-2489 MI0011326 1 chr14 48380355 48380432 + -
bta-mir-2311 MI0011327 2 chr14 79319904 79319958 - -
bta-mir-2284j MI0011328 12 chr15 32231535 32231609 - -
bta-mir-2312 MI0011329 11 chr15 32231536 32231608 + -
bta-mir-2313 MI0011330 33 chr15 34811780 34811853 + -
bta-mir-2284t MI0011331 10 chr15 39355496 39355568 - High
bta-mir-2285b-1 MI0011332 18 chr15 39785119 39785190 - -
bta-mir-2314 MI0011333 17 chr15 40546569 40546629 - -
bta-mir-2315 MI0011334 2 chr15 42948221 42948300 + -
bta-mir-2284d MI0011335 37 chr15 43745466 43745543 - -
bta-mir-2316 MI0011336 4 chr15 47491046 47491120 + -
bta-mir-2317 MI0011337 1 chr15 52579672 52579743 - -
bta-mir-1343 MI0011338 32 chr15 66591432 66591509 + -
bta-mir-2318 MI0011339 19 chr15 78735576 78735654 + -
bta-mir-2319a MI0011340 4 chr15 78018299 78018373 - -
bta-mir-2319b MI0011341 1 chr15 78018301 78018371 + -
bta-mir-2320 MI0011342 23 chr16 50680566 50680640 + High
bta-mir-2284n MI0011343 6 chr16 78601277 78601346 - -
bta-mir-2284g MI0011344 0 chr17 12953898 12953968 + -
bta-mir-2321 MI0011345 None chr17 43093422 43093487 + -
bta-mir-1721 MI0011346 1 chr17 54368599 54368664 - -
bta-mir-2322 MI0011347 1 chr17 53922305 53922374 + -
bta-mir-2323 MI0011348 3 chr17 73838995 73839070 - -
bta-mir-2324 MI0011349 None chr18 1627737 1627807 - -
bta-mir-2325a MI0011350 9 chr18 11969336 11969410 - -
bta-mir-2326 MI0011351 0 chr18 12005708 12005781 - -
bta-mir-2327 MI0011352 1 chr18 14043978 14044047 + -
bta-mir-2328 MI0011353 5 chr18 39466275 39466352 + -
bta-mir-2329-1 MI0011354 1 chr18 48765693 48765758 - -
bta-mir-2329-2 MI0011355 1 chr18 48765693 48765758 + -
bta-mir-2330 MI0011356 5 chr18 56523420 56523497 - -
bta-mir-2331 MI0011357 6 chr19 15413552 15413622 + -
bta-mir-2332 MI0011358 33 chr19 18689292 18689360 + -
bta-mir-2333 MI0011359 1 chr19 18920681 18920743 - -
bta-mir-2334 MI0011360 1 chr19 21556448 21556519 - -
bta-mir-2335 MI0011361 3 chr19 22768275 22768343 + -
bta-mir-2336 MI0011362 29 chr19 22956198 22956273 + -
bta-mir-2337 MI0011363 None chr19 23805568 23805647 + -
bta-mir-199c MI0011364 158 chr19 26881087 26881162 + -
bta-mir-2338 MI0011365 3 chr19 27440238 27440310 + -
bta-mir-2339 MI0011366 9 chr19 32129951 32130022 - -
bta-mir-1814a MI0011367 None chr19 38577858 38577929 + -
bta-mir-2340 MI0011368 1 chr19 39064838 39064913 + -
bta-mir-2341 MI0011369 1 chr19 40263479 40263537 + -
bta-mir-2342 MI0011370 4 chr19 40692256 40692329 + -
bta-mir-2343 MI0011371 1 chr19 45394335 45394408 - -
bta-mir-2344 MI0011372 197 chr19 50633090 50633150 - -
bta-mir-2345 MI0011373 None chr19 51063426 51063488 - -
bta-mir-2346 MI0011374 8 chr19 51734621 51734699 + -
bta-mir-2347 MI0011375 3 chr19 51809416 51809474 + -
bta-mir-2348 MI0011376 1 chr19 54879043 54879121 + -
bta-mir-2349 MI0011377 8 chr19 54443955 54444019 - -
bta-mir-2284p MI0011378 9 chr19 63733926 63734002 + -
bta-mir-2350 MI0011379 1 chr2 5403662 5403737 + -
bta-mir-2351 MI0011380 None chr2 9716611 9716686 - -
bta-mir-2352 MI0011381 0 chr2 24279116 24279191 - -
bta-mir-2353 MI0011382 3 chr2 27726597 27726671 - -
bta-mir-2354 MI0011383 0 chr2 47615954 47616028 + -
bta-mir-2355 MI0011384 30 chr2 96174724 96174803 - -
bta-mir-2356 MI0011385 1 chr2 107111453 107111525 - -
bta-mir-2357 MI0011386 4 chr2 121911143 121911221 - -
bta-mir-2284u MI0011387 2 chr2 131328372 131328447 + -
bta-mir-2358 MI0011388 0 chr2 136232983 136233046 + -
bta-mir-2359 MI0011389 0 chr20 23294747 23294825 + -
bta-mir-2360 MI0011390 2 chr20 37198239 37198308 - -
bta-mir-2361 MI0011391 0 chr20 53608038 53608113 + -
bta-mir-2362 MI0011392 1 chr21 5692151 5692217 - -
bta-mir-2363-1 MI0011393 1 chr21 21233983 21234056 + -
bta-mir-2363-2 MI0011394 1 chr21 21233984 21234055 - -
bta-mir-2364 MI0011395 0 chr21 22938408 22938481 + -
bta-mir-2365 MI0011396 None chr21 50509580 50509658 + -
bta-mir-2366 MI0011397 1 chr21 56064696 56064764 + -
bta-mir-2284f MI0011398 6 chr21 57993852 57993913 + -
bta-mir-2284a MI0011399 1 chr21 61576051 61576124 + -
bta-mir-2284k MI0011400 5 chr21 70380569 70380642 - -
bta-mir-1814b MI0011401 0 chr22 5046765 5046842 + -
bta-mir-2367 MI0011402 7 chr22 11462463 11462541 + -
bta-mir-2368 MI0011403 10 chr22 15960043 15960123 + -
bta-mir-2369 MI0011404 0 chr22 40309978 40310047 - -
bta-mir-2370 MI0011405 5 chr22 43913732 43913810 - -
bta-mir-2371 MI0011406 0 chr22 45251919 45251990 + -
bta-mir-2372 MI0011407 2 chr22 56919008 56919084 + -
bta-mir-2373 MI0011408 5 chr22 57711844 57711921 + -
bta-mir-2374 MI0011409 1 chr22 60062472 60062548 + -
bta-mir-2375 MI0011410 0 chr23 3208424 3208497 + -
bta-mir-2376 MI0011411 12 chr23 7447155 7447222 - -
bta-mir-2377 MI0011412 2 chr23 13119948 13120016 - -
bta-mir-2378 MI0011413 3 chr23 28284050 28284127 - -
bta-mir-2379 MI0011414 4 chr23 30873804 30873881 - -
bta-mir-2284c MI0011415 7 chr23 35734835 35734914 + -
bta-mir-2325b MI0011416 0 chr23 39980854 39980919 + -
bta-mir-2380 MI0011417 1 chr24 31140776 31140847 + -
bta-mir-2381 MI0011418 5 chr24 49897870 49897939 + -
bta-mir-2382 MI0011419 4 chr25 1755398 1755474 - -
bta-mir-2383 MI0011420 2 chr25 3007887 3007962 + -
bta-mir-2384 MI0011421 2 chr25 18823097 18823169 - -
bta-mir-2325c MI0011423 None chr25 26815999 26816064 - -
bta-mir-2385 MI0011424 1 chr25 26827543 26827617 - -
bta-mir-2284v MI0011425 18 chr25 23762326 23762385 - -
bta-mir-2386 MI0011426 None chr25 29645290 29645364 + -
bta-mir-2387 MI0011427 21 chr25 33609132 33609209 - -
bta-mir-2388 MI0011428 11 chr25 35471283 35471361 - High
bta-mir-2389 MI0011429 11 chr25 42477902 42477983 + -
bta-mir-2390 MI0011430 0 chr25 40833360 40833431 + -
bta-mir-2392 MI0011432 1 chr26 23732830 23732900 + -
bta-mir-2393 MI0011433 0 chr26 25496390 25496443 + -
bta-mir-2394 MI0011434 3 chr26 31498704 31498771 - -
bta-mir-2395 MI0011435 3 chr26 37602362 37602435 - -
bta-mir-2396 MI0011436 4 chr26 42678160 42678228 + -
bta-mir-2285c MI0011437 6 chr26 47382359 47382423 - -
bta-mir-2397 MI0011438 10 chr26 49944498 49944571 + -
bta-mir-2398 MI0011439 5 chr27 18543429 18543507 - -
bta-mir-2399 MI0011440 9 chr27 25852073 25852150 + -
bta-mir-2400 MI0011441 16 chr27 33396764 33396837 - -
bta-mir-2284q MI0011442 0 chr27 35183619 35183683 - -
bta-mir-2401 MI0011443 1 chr27 40155089 40155163 + -
bta-mir-2402 MI0011444 1 chr28 7932357 7932424 + -
bta-mir-2403 MI0011445 9 chr28 15573127 15573201 + -
bta-mir-2404-1 MI0011446 8 chr17 6182519 6182583 - -
bta-mir-449d MI0011447 0 chr29 25365714 25365788 - -
bta-mir-2405 MI0011448 None chr29 40922444 40922513 - -
bta-mir-2406 MI0011449 1 chr29 43144785 43144857 + -
bta-mir-2407 MI0011450 3 chr29 44375587 44375659 + -
bta-mir-2408 MI0011451 17 chr29 45825483 45825543 - -
bta-mir-2409 MI0011452 3 chr29 50778892 50778955 - -
bta-mir-2410 MI0011453 4 chr29 51395672 51395747 + -
bta-mir-1584 MI0011454 2 chr3 9944706 9944778 + -
bta-mir-2411 MI0011456 163 chr3 16484204 16484280 - -
bta-mir-2412 MI0011457 0 chr3 19031709 19031786 - -
bta-mir-2413 MI0011458 1 chr3 33913672 33913750 - -
bta-mir-2284m MI0011459 3 chr2 118676795 118676861 - -
bta-mir-2414 MI0011460 1 chr3 102657584 102657657 + -
bta-mir-2415 MI0011461 5 chr3 103277273 103277339 + -
bta-mir-2416 MI0011462 4 chr3 107635294 107635375 - -
bta-mir-2417 MI0011463 3 chr4 50529407 50529481 - -
bta-mir-2418 MI0011464 1 chr4 49511668 49511743 - -
bta-mir-2284b MI0011465 1 chr4 47568652 47568722 - -
bta-mir-1814c MI0011466 5 chr4 63662503 63662577 + -
bta-mir-2419 MI0011467 86 chr4 66580841 66580916 - -
bta-mir-2420 MI0011468 None chr4 76863378 76863455 - -
bta-mir-2421 MI0011469 None chr4 79404961 79405038 - -
bta-mir-2422 MI0011470 39 chr4 93932865 93932932 + -
bta-mir-1843 MI0011471 2 chr4 94114046 94114114 - -
bta-mir-320b MI0011472 0 chr4 96742431 96742502 - -
bta-mir-2423 MI0011473 None chr4 98397479 98397551 + -
bta-mir-2424 MI0011474 29 chr5 104548335 104548414 - Low
bta-mir-2425 MI0011475 7 chr5 30303905 30303985 + -
bta-mir-2426 MI0011476 3 chr5 31013066 31013139 + -
bta-mir-2427 MI0011477 8 chr5 44261010 44261084 + -
bta-mir-2428 MI0011478 3 chr5 42062305 42062369 + -
bta-mir-2429 MI0011479 0 chr5 49122825 49122899 - -
bta-mir-2430 MI0011480 1 chr5 56469290 56469362 - -
bta-mir-2431 MI0011481 28 chr5 56831689 56831756 - High
bta-mir-677 MI0011482 16 chr5 57298281 57298346 + -
bta-mir-2432 MI0011483 2 chr5 57514615 57514685 - -
bta-mir-2433 MI0011484 4 chr5 57577222 57577298 - -
bta-mir-2434 MI0011485 None chr5 65155097 65155170 - -
bta-mir-2435 MI0011486 6 chr5 68385462 68385531 + -
bta-mir-2436 MI0011487 7 chr5 84472387 84472461 - -
bta-mir-2284r MI0011488 5 chr5 101827349 101827411 - -
bta-mir-2437 MI0011490 0 chr5 108361133 108361193 - -
bta-mir-2438 MI0011491 0 chr5 110337508 110337574 + -
bta-mir-2439 MI0011492 6 chr5 112696083 112696160 - -
bta-mir-2440 MI0011493 14 chr5 111571292 111571367 - -
bta-mir-2441 MI0011494 6 chr5 113232522 113232591 + -
bta-mir-2442 MI0011495 1 chr5 113966426 113966501 - -
bta-mir-2443 MI0011496 63 chr5 117458061 117458133 + -
bta-mir-2284h MI0011497 249 chr5 118691017 118691083 + -
bta-mir-2444 MI0011498 0 chr6 15594650 15594724 - -
bta-mir-2446 MI0011500 9 chr6 100390755 100390825 - -
bta-mir-2447 MI0011501 16 chr6 99998897 99998973 - -
bta-mir-2448 MI0011502 16 chr6 116014595 116014667 - High
bta-mir-2449 MI0011503 4 chr6 109528856 109528927 + -
bta-mir-2450c MI0011504 0 chr6 108174504 108174575 - -
bta-mir-2450b MI0011505 3 chr6 108173861 108173933 - -
bta-mir-2450a MI0011506 54 chr6 108173591 108173663 - -
bta-mir-2451 MI0011507 1 chr6 108109236 108109302 - -
bta-mir-1777a MI0011508 4 chr6 107617597 107617672 - -
bta-mir-2452 MI0011509 None chr6 119334788 119334865 + -
bta-mir-2453 MI0011510 4 chr6 118797283 118797361 + -
bta-mir-2454 MI0011511 13 chr7 15988170 15988241 - High
bta-mir-2455 MI0011512 2 chr7 18013236 18013311 - -
bta-mir-339b MI0011513 170 chr7 18457361 18457418 - -
bta-mir-1434 MI0011514 29 chr7 21336498 21336570 + -
bta-mir-2456 MI0011515 1 chr7 21353040 21353111 + -
bta-mir-2457 MI0011516 8 chr7 23508149 23508219 - -
bta-mir-2458 MI0011517 1 chr7 28831344 28831410 - -
bta-mir-2459 MI0011518 10 chr7 51547814 51547883 + -
bta-mir-2460 MI0011519 7 chr7 55733304 55733371 - -
bta-mir-1777b MI0011520 2 chr7 63811144 63811223 - -
bta-mir-2461 MI0011521 2 chr7 64173743 64173824 + -
bta-mir-2462 MI0011522 1 chr7 83011874 83011942 + -
bta-mir-2463 MI0011523 5 chr7 85605203 85605273 - -
bta-mir-2464 MI0011524 2 chr7 93149817 93149886 + -
bta-mir-2465 MI0011525 3 chr7 110612582 110612661 - -
bta-mir-2466 MI0011526 4 chr8 936634 936691 + -
bta-mir-2467 MI0011527 3 chr8 1200654 1200732 - -
bta-mir-2468 MI0011528 12 chr8 5727335 5727407 + -
bta-mir-2469 MI0011529 3 chr8 11455248 11455314 - -
bta-mir-2470 MI0011530 None chr8 41004519 41004592 + -
bta-mir-2471 MI0011531 1 chr8 40689733 40689802 + -
bta-mir-2472 MI0011532 1 chr8 62837254 62837324 - -
bta-mir-2473 MI0011533 4 chr8 62853246 62853317 - -
bta-mir-2474 MI0011534 6 chr8 62886716 62886774 - -
bta-mir-2404-2 MI0011535 7 chr8 74786940 74787006 - -
bta-mir-2475 MI0011536 8 chr8 83482947 83483017 + -
bta-mir-2284o MI0011538 0 chr9 25596364 25596424 + -
bta-mir-2477 MI0011539 42 chr9 26422091 26422162 + -
bta-mir-2478 MI0011540 207 chr9 28165967 28166043 - -
bta-mir-2479 MI0011541 0 chr9 37643907 37643979 + -
bta-mir-2480 MI0011542 0 chr9 91772145 91772212 - -
bta-mir-2481 MI0011543 0 chr9 95721568 95721631 + -
bta-mir-2482 MI0011544 None chr9 100078903 100078979 - -
bta-mir-2483 MI0011545 23 chrX 9234274 9234353 - High
bta-mir-2484 MI0011546 23 chrX 20570714 20570789 - -
bta-mir-664a MI0011547 6 chrX 39531384 39531465 - -
bta-mir-2485 MI0011548 0 chrX 40578826 40578887 - -
bta-mir-2284e MI0011549 2 chrX 61745932 61745995 - -
bta-mir-2486 MI0011550 1 chrX 93322748 93322826 - -
bta-mir-2488 MI0011552 None chrX 111144243 111144315 + -
bta-let-7f-2 MI0004734 15341 chrX 97466644 97466726 - High
bta-mir-21 MI0004742 17881 chr19 11138471 11138542 + High
bta-mir-320a-2 MI0004748 926 chr20 15289880 15289961 + -
bta-mir-140 MI0005010 2906 chr18 37196457 37196550 + High
bta-mir-218-2 MI0005017 52 chr20 443261 443322 - -
bta-let-7d MI0005026 807 chr8 87366413 87366499 + High
bta-let-7g MI0005051 2040 chr22 49372363 49372445 + High
bta-let-7a-1 MI0005057 11865 chr8 87363854 87363933 + High
bta-let-7f-1 MI0005062 15133 chr8 87364207 87364293 + High
bta-let-7i MI0005065 3806 chr5 51387456 51387539 - High
bta-let-7a-2 MI0005451 11827 chr15 33533448 33533519 - -
bta-let-7a-3 MI0005452 11878 chr5 117457806 117457879 + High
bta-let-7b MI0005453 4232 chr5 117458606 117458686 + High
bta-let-7c MI0005454 1399 chr1 19984844 19984927 - High
bta-let-7e MI0005455 535 chr18 58266748 58266826 + High
bta-mir-194-2 MI0009765 4433 chr29 44018295 44018377 + High
bta-mir-218-1 MI0009780 65 chr6 41756487 41756596 + -
bta-mir-219-1 MI0009781 3 chr11 99257286 99257381 - -
bta-mir-338 MI0009805 105 chr19 52407324 52407415 + -
bta-mir-365-2 MI0009812 137 chr19 18918387 18918497 - -
bta-mir-451 MI0009837 80 chr19 20922863 20922933 - -
bta-mir-877 MI0009903 49 chr23 28284423 28284524 - -
bta-mir-1468 MI0012207 580 chrX 102956334 102956430 + -
bta-mir-194-1 MI0012208 5679 chr16 24405220 24405316 - High
bta-mir-320a-1 MI0012211 926 chr8 70428971 70429052 - -
bta-mir-1277 MI0021114 32 chrX 2445343 2445420 + High
bta-mir-219-2 MI0025539 13 None None -
bta-mir-1842 MI0031498 47 chr25 1755151 1755210 - -
bta-mir-219b MI0032929 20 chr11 99257288 99257375 + -
bta-mir-194b MI0032935 20 chr16 24405226 24405310 + -
bta-mir-194b-2 MI0038456 12 chr29 44018309 44018361 - -



Comments or questions? Email mirbase@manchester.ac.uk