Stem-loop bta-mir-2450a

Accession

MI0011506

Description

Bos taurus bta-mir-2450a precursor miRNA mir-2450

Gene
family

RF03390; mir-2450

Literature search

1 open access papers mention bta-mir-2450a
(1 sentences)

Sequence

606 reads, 54 reads per million, 9 experiments

agaggcgcgugugccuuuucugcacacuugguauagacucgcacacaUGGGCAGUAGAGGUGCAUGUGccuuu
.(((((((((((((((((.((((.((..((((........)).))..)).)))).))))))))))))))))).

Structure

a                 u    a  cu  -  aua 
 gaggcgcgugugccuuu cugc ca  ug gu   g
 ||||||||||||||||| |||| ||  || ||    
 uuccGUGUACGUGGAGA GACG GU  ac cg   a
u                 U    G  ac  a  cuc 

Annotation confidence Not enough data

Genome context

chr6: 108173591-108173663 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from bta-mir-2450a

Mature bta-miR-2450a

• Accession: MIMAT0012030
• Description: Bos taurus bta-miR-2450a mature miRNA
• Sequence: 48 - UGGGCAGUAGAGGUGCAUGUG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349