Stem-loop bta-mir-2398

Accession

MI0011439

Description

Bos taurus bta-mir-2398 precursor miRNA

Sequence

33 reads, 5 reads per million, 10 experiments

cucggggugagcAUCUAGGGACGCGUCGGCAACUgcaggacccccugguugccuccccgccccucuugcugaccccggg
((((((((.((((...((((.((.(..((((((..((((....))))))))))..).)).))))..)))).))))))))

Structure

        g    UCU    A  C UC      Ug    a 
cucggggu agcA   AGGG CG G  GGCAAC  cagg c
|||||||| ||||   |||| || |  ||||||  ||||  
gggcccca ucgu   uccc gc c  ccguug  gucc c
        g    -uc    c  c cu      --    c 

Annotation confidence Not enough data

Genome context

chr27: 18543429-18543507 [-]

Mature bta-miR-2398

• Accession: MIMAT0011953
• Description: Bos taurus bta-miR-2398 mature miRNA
• Sequence: 13 - AUCUAGGGACGCGUCGGCAACU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349