Stem-loop bta-mir-320a-1

Accession

MI0012211

Description

Bos taurus bta-mir-320a-1 precursor miRNA mir-320

Gene
family

RF00736; mir-320

Literature search

15 open access papers mention bta-mir-320a-1
(78 sentences)

Sequence

5535464 reads, 2381.0 reads per million, 321 experiments

cccgcggcgucucgcuccccuccGCCUUCUCUUCCCGGUUCUUCCcggagucgggAAAAGCUGGGUUGAGAGGGCGAaaaag
...(((......))).......(((((((((..(((((((.((((((....)))))).)))))))..)))))))))......

Structure

cccgcggcgucucgcuccccuc         UU       C      g 
                      cGCCUUCUC  CCCGGUU UUCCcg a
                      |||||||||  ||||||| ||||||  
                      GCGGGAGAG  GGGUCGA AAgggc g
----------------gaaaaA         UU       A      u 

Annotation confidence High

Genome context

8: 69558096-69558177 [-]

Mature bta-miR-320a-5p

• Accession: MIMAT0050780
• Description: Bos taurus bta-miR-320a-5p mature miRNA
• Sequence: 24 - GCCUUCUCUUCCCGGUUCUUCC - 45
• Evidence: experimental ; cloned [2]

Mature bta-miR-320a-3p

• Accession: MIMAT0003534
• Description: Bos taurus bta-miR-320a-3p mature miRNA
• Sequence: 56 - AAAAGCUGGGUUGAGAGGGCGA - 77
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343


2. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90