miRBase entry: bta-mir-2285c

Stem-loop bta-mir-2285c


Accession
MI0011437
Description
Bos taurus bta-mir-2285c precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
13 open access papers mention bta-mir-2285c
(17 sentences)

Sequence

55 reads, 6 reads per million, 28 experiments
gccgaaauguucguugaaguuuuuccauggggugucacggaagAAACCUGAACAAACUUUUUGGC
(((((((.(((.(((.(.((((((((.(((....))).)).)))))).).))).))).)))))))

Structure
       u   c   g a      -  a   g 
gccgaaa guu guu a guuuuu cc ugg g
||||||| ||| ||| | |||||| || |||  
CGGUUUU CAA CAA U CAAAga gg acu u
       U   A   G C      a  c   g 


Annotation confidence Not enough data
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Genome context
chr26: 47382359-47382423 [-]

Database links

Mature bta-miR-2285c

Accession MIMAT0011950
Description Bos taurus bta-miR-2285c mature miRNA
Sequence 44 - AAACCUGAACAAACUUUUUGGC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349