Stem-loop bta-mir-339b

Accession

MI0011513

Description

Bos taurus bta-mir-339b precursor miRNA

Literature search

5 open access papers mention bta-mir-339b
(5 sentences)

Sequence

1293686 reads, 501.0 reads per million, 321 experiments

UCCCUGUCCUCCAGGAGCUCcaggucugggguggguguggggauuucugcaggaggga
((((..((((.(((((((((((.((((.....)))).))))).)))))).))))))))

Structure

    UG    C      -     g    g 
UCCC  UCCU CAGGAG CUCca gucu g
||||  |||| |||||| ||||| |||| g
aggg  agga gucuuu ggggu uggg g
    --    c      a     g    u 

Annotation confidence Not enough data

Genome context

7: 17148728-17148785 [-]

Mature bta-miR-339b-5p

• Accession: MIMAT0012038
• Description: Bos taurus bta-miR-339b-5p mature miRNA
• Sequence: 1 - UCCCUGUCCUCCAGGAGCUC - 20
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349