Stem-loop bta-mir-2318

Accession

MI0011339

Description

Bos taurus bta-mir-2318 precursor miRNA mir-2318

Gene
family

RF03746; mir-2318

Literature search

2 open access papers mention bta-mir-2318
(2 sentences)

Sequence

332 reads, 19 reads per million, 56 experiments

ugucaggaaccccGUGUAUGAUGAAUUAUCUGACCcggccguugccucucauguaacgcuucucauggcucucacugca
((.(((((...(((((...((.(..((((.(((...(((....)))..))).))))..).)).)))))...)).)))))

Structure

  u   -  acc     UAU  U AA    C   CCc   c 
ug cag ga   ccGUG   GA G  UUAU UGA   ggc g
|| ||| ||   |||||   || |  |||| |||   |||  
ac guc cu   gguac   cu c  aaug acu   ccg u
  -   a  cuc     --u  u gc    u   -cu   u 

Annotation confidence Not enough data

Genome context

chr15: 78735576-78735654 [+]

Mature bta-miR-2318

• Accession: MIMAT0011841
• Description: Bos taurus bta-miR-2318 mature miRNA
• Sequence: 14 - GUGUAUGAUGAAUUAUCUGACC - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349