Stem-loop bta-mir-2284j

Accession

MI0011328

Description

Bos taurus bta-mir-2284j precursor miRNA

Gene family

MIPF0000747; mir-2284

Literature search

14 open access papers mention bta-mir-2284j
(35 sentences)

Sequence

122 reads, 12 reads per million, 5 experiments

guuggugggccGAAAAGUUCGUUCAGGUUUUccaaguuacagaauaacccagacaaacuguuuggccagcccaau
...(((.(((((((.((((.(((..(((((((.........))).))))..))).)))).))))))).)))....

Structure

-guu   g       A    C   CA    -   caa 
    ggu ggccGAA AGUU GUU  GGUU UUc   g
    ||| ||||||| |||| |||  |||| |||   u
    ccg ccgguuu ucaa cag  ccaa aag   u
uaac   a       g    a   ac    u   aca 

Annotation confidence Not enough data

Genome context

chr15: 32231535-32231609 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2284j

Mature bta-miR-2284j

• Accession: MIMAT0011827
• Description: Bos taurus bta-miR-2284j mature miRNA
• Sequence: 12 - GAAAAGUUCGUUCAGGUUUU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349