Stem-loop bta-mir-2389

Accession

MI0011429

Description

Bos taurus bta-mir-2389 precursor miRNA

Literature search

2 open access papers mention bta-mir-2389
(3 sentences)

Sequence

79 reads, 11 reads per million, 10 experiments

gcgcccgggcggggccGAGGGGACUCGGGAGUCGGAGcggagaaccagcccccggccgccgcguccccgcgccgcuccccgc
(((...((((((.((...((((((.(((..(((((.((((....)).))..)))))..))).)))))))).))))))..)))

Structure

   ccc      g  cGA      U   GA     -A  -  a 
gcg   gggcgg gc   GGGGAC CGG  GUCGG  Gc gg g
|||   |||||| ||   |||||| |||  |||||  || ||  
cgc   cucgcc cg   ccccug gcc  cggcc  cg cc a
   -cc      g  ---      c   gc     cc  a  a 

Annotation confidence Not enough data

Genome context

chr25: 42477902-42477983 [+]

Mature bta-miR-2389

• Accession: MIMAT0011942
• Description: Bos taurus bta-miR-2389 mature miRNA
• Sequence: 17 - GAGGGGACUCGGGAGUCGGAG - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349