Stem-loop bta-mir-2382

Accession

MI0011419

Description

Bos taurus bta-mir-2382 precursor miRNA

Literature search

1 open access papers mention bta-mir-2382
(1 sentences)

Sequence

18 reads, 1 reads per million, 10 experiments

gcugcacuuguAGGGGAGUGCCUGGGAAGCUGUuccuuuuggccgaCUACUUCCUGGUGCCUCGCCCCACacccagc
((((....(((.((((((.((((((((((..(((((....))..)))..)))))))).))))).))).)))..))))

Structure

    cacu   A   -   U  -        CU   --  u 
gcug    ugu GGG GAG GC CUGGGAAG  GUu  cc u
||||    ||| ||| ||| || ||||||||  |||  ||  
cgac    aCA CCC CUC CG GGUCCUUC  Cag  gg u
    --cc   C   G   -  U        AU   cc  u 

Annotation confidence Not enough data

Genome context

chr25: 1755398-1755474 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2382

Mature bta-miR-2382-5p

• Accession: MIMAT0011930
• Description: Bos taurus bta-miR-2382-5p mature miRNA
• Sequence: 12 - AGGGGAGUGCCUGGGAAGCUGU - 33
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2382-3p

• Accession: MIMAT0011931
• Description: Bos taurus bta-miR-2382-3p mature miRNA
• Sequence: 47 - CUACUUCCUGGUGCCUCGCCCCAC - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349