Accession
MI0005465
Description
Bos taurus
bta-mir-365-1 precursor miRNA mir-365
Gene
family?
family?
RF00659;
mir-365
Literature search
6 open access papers mention bta-mir-365-1
(15 sentences)
(15 sentences)
Sequence
5631
reads,
48
reads per million, 66 experiments
accgcagggaaaaugAGGGACUUUUGGGGGCAGAUGUGuuugcauuccacuaucaUAAUGCCCCUAAAAAUCCUUAUugcucuugca
...((((((..((((((((..(((((((((((((((((.........))).)))....))))))))))).))))))))..)))))).
...((((((..((((((((..(((((((((((((((((.........))).)))....))))))))))).))))))))..)))))).
Structure
acc aa AC ---- - uuu gcaggg aaugAGGG UUUUGGGGGCA GAU GUG g |||||| |||||||| ||||||||||| ||| ||| c cguucu uUAUUCCU AAAAUCCCCGU cua cac a --a cg -A AAUa u cuu
Annotation confidence
High
Do you think this miRNA is real?
Comments
High-throughput sequencing suggests that the dominant miRNA arises from the 5' arm of this precursor [3], in contrast to earlier studies.
Genome context
chr25: 13401780-13401866 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-365-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bta-miR-365-5p
| Accession | MIMAT0012539 |
| Description | Bos taurus bta-miR-365-5p mature miRNA |
| Sequence | 16 - AGGGACUUUUGGGGGCAGAUGUG - 38 |
| Evidence |
experimental
Illumina [3] |
Mature bta-miR-365-3p
| Accession | MIMAT0004341 |
| Description | Bos taurus bta-miR-365-3p mature miRNA |
| Sequence | 56 - UAAUGCCCCUAAAAAUCCUUAU - 77 |
| Evidence |
experimental
cloned [2] |
References
|
