Stem-loop bta-mir-1277

Accession

MI0021114

Description

Bos taurus bta-mir-1277 precursor miRNA mir-1277

Gene
family

RF04154; mir-1277

Literature search

5 open access papers mention bta-mir-1277
(5 sentences)

Sequence

15323 reads, 8.0 reads per million, 294 experiments

accucccaaaUAUAUAUAUAUAUGUACGUAUGuguauaugaauguaUACGUAGAUAUAUAUGUAUUUUugguggguuu
((((.(((((.((((((((((((.(((((((((((......))))))))))).)))))))))))).))))).))))..

Structure

--    c     U            G           au 
  accu ccaaa AUAUAUAUAUAU UACGUAUGugu  a
  |||| ||||| |||||||||||| |||||||||||   
  uggg gguUU UAUGUAUAUAUA AUGCAUaugua  u
uu    u     U            G           ag 

Annotation confidence High

Genome context

X: 2569960-2570037 [+]

Mature bta-miR-1277-5p

• Accession: MIMAT0061044
• Description: Bos taurus bta-miR-1277-5p mature miRNA
• Sequence: 11 - UAUAUAUAUAUAUGUACGUAUG - 32
• Evidence: experimental ; Illumina [1-2]

Mature bta-miR-1277-3p

• Accession: MIMAT0024569
• Description: Bos taurus bta-miR-1277-3p mature miRNA
• Sequence: 47 - UACGUAGAUAUAUAUGUAUUUU - 68
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026


2. PubMed ID: 22298343
   Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
   Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
   J Cell Biochem (2012) 113:2098-2111