Stem-loop bta-mir-2299

Accession

MI0011309

Description

Bos taurus bta-mir-2299 precursor miRNA

Literature search

2 open access papers mention bta-mir-2299
(6 sentences)

Sequence

19618 reads, 8.0 reads per million, 313 experiments

uaacugaacacACUGGAUUCAUUUCUCUGAAAGUggauuuuguggucuGUCCGGGGAAUGGAUCCAGCGUgaucgguug
(((((((.(((.(((((((((((((((.((...((((((....)))))))).))))))))))))))).))).)))))))

Structure

       a   A               U  AAG      u 
uaacuga cac CUGGAUUCAUUUCUC GA   Uggauu u
||||||| ||| ||||||||||||||| ||   ||||||  
guuggcu gUG GACCUAGGUAAGGGG CU   Gucugg g
       a   C               C  ---      u 

Annotation confidence High

Genome context

12: 29635268-29635346 [-]

Mature bta-miR-2299-5p

• Accession: MIMAT0011807
• Description: Bos taurus bta-miR-2299-5p mature miRNA
• Sequence: 12 - ACUGGAUUCAUUUCUCUGAAAGU - 34
• Evidence: experimental ; Illumina [1-2]

Mature bta-miR-2299-3p

• Accession: MIMAT0011808
• Description: Bos taurus bta-miR-2299-3p mature miRNA
• Sequence: 49 - GUCCGGGGAAUGGAUCCAGCGU - 70
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349


2. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026