Stem-loop bta-mir-2422

Accession

MI0011470

Description

Bos taurus bta-mir-2422 precursor miRNA

Literature search

1 open access papers mention bta-mir-2422
(1 sentences)

Sequence

1683 reads, 2.0 reads per million, 179 experiments

uccUUGAGGGGACUGAGGUGCGGAGacgcacagaucauugauccUCCGCUUCCCACGUCUCCUCAGga
..(((((((((((((.((.((((((.......((((...))))))))))..)))).))))))))))).

Structure

uc           -  A  -U      acgcaca    a 
  cUUGAGGGGAC UG GG  GCGGAG       gauc  
  ||||||||||| || ||  ||||||       |||| u
  gGACUCCUCUG AC CC  CGCCUc       cuag  
-a           C  -  UU      -------    u 

Annotation confidence Medium

Genome context

4: 92808114-92808181 [+]

Mature bta-miR-2422-5p

• Accession: MIMAT0011989
• Description: Bos taurus bta-miR-2422-5p mature miRNA
• Sequence: 4 - UUGAGGGGACUGAGGUGCGGAG - 25
• Evidence: experimental ; Illumina [1-2]

Mature bta-miR-2422-3p

• Accession: MIMAT0050939
• Description: Bos taurus bta-miR-2422-3p mature miRNA
• Sequence: 45 - UCCGCUUCCCACGUCUCCUCAG - 66
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349


2. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026