Stem-loop bta-mir-2411

Accession

MI0011456

Description

Bos taurus bta-mir-2411 precursor miRNA

Literature search

3 open access papers mention bta-mir-2411
(8 sentences)

Sequence

29061 reads, 15.0 reads per million, 312 experiments

gaggaaaUGUGGAGUGACUGUCAGAUGCAGccagcagaauaagugguuuggcUGAACUGUCUUACUCCCACAUCCuc
(((((..((.(((((((..(.(((.(.(((((((((.......))..)))))))).))).))))))))))..)))))

Structure

     aa  U       CU U   A G       --  ga 
gagga  UG GGAGUGA  G CAG U CAGccag  ca  a
|||||  || |||||||  | ||| | |||||||  ||  u
cuCCU  AC CCUCAUU  C GUC A GUcgguu  gu  a
     AC  -       -- U   A -       ug  ga 

Annotation confidence Medium

Genome context

3: 16269732-16269808 [-]

Mature bta-miR-2411-5p

• Accession: MIMAT0011972
• Description: Bos taurus bta-miR-2411-5p mature miRNA
• Sequence: 8 - UGUGGAGUGACUGUCAGAUGCAG - 30
• Evidence: experimental ; Illumina [1-2]

Mature bta-miR-2411-3p

• Accession: MIMAT0011973
• Description: Bos taurus bta-miR-2411-3p mature miRNA
• Sequence: 53 - UGAACUGUCUUACUCCCACAUCC - 75
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349


2. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026