Stem-loop bta-mir-451

Accession

MI0009837

Description

Bos taurus bta-mir-451 precursor miRNA mir-451

Gene
family

RF00722; mir-451

Literature search

18 open access papers mention bta-mir-451
(56 sentences)

Sequence

6910 reads, 80 reads per million, 65 experiments

cuugggguggcgaggAAACCGUUACCAUUACUGAGUUUaguaaugguaacgguucucuugcugcacccaga
.((((((((((((((.((((((((((((((((......)))))))))))))))).))))))))).))))).

Structure

c     -         A                GA 
 uuggg guggcgagg AACCGUUACCAUUACU  G
 ||||| ||||||||| ||||||||||||||||   
 gaccc cgucguucu uuggcaaugguaauga  U
a     a         c                UU 

Annotation confidence Not enough data

Genome context

chr19: 20922863-20922933 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-451

Mature bta-miR-451

• Accession: MIMAT0009323
• Description: Bos taurus bta-miR-451 mature miRNA
• Sequence: 16 - AAACCGUUACCAUUACUGAGUUU - 38
• Evidence: experimental ; cloned [3-4]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343


3. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


4. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125