Annotation of 390 bovine miRNA genes by sequence similarity with other species |
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PubMed ID | 18945293 |
Authors | "Strozzi F, Mazza R, Malinverni R, Williams JL" |
Journal | "Anim Genet |
Volume | 40 |
Pages | 125 |
Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
---|---|---|---|---|---|---|---|
bta-mir-1-2 | MI0009718 | 574 | chr24 | 34928847 | 34928931 | + | - |
bta-mir-1-1 | MI0009719 | 574 | chr13 | 55456488 | 55456563 | - | - |
bta-mir-100 | MI0009720 | 673 | chr15 | 33539274 | 33539349 | - | High |
bta-mir-101-1 | MI0009721 | 1082 | chr3 | 80980185 | 80980267 | + | High |
bta-mir-105b | MI0009722 | 5 | chrX | 35238515 | 35238594 | - | - |
bta-mir-105a | MI0009723 | 10 | chrX | 35236061 | 35236141 | - | - |
bta-mir-106b | MI0009724 | 247 | chr25 | 37072314 | 37072393 | + | High |
bta-mir-124a-2 | MI0009725 | 13 | chr14 | 31015073 | 31015183 | + | - |
bta-mir-124b | MI0009726 | 13 | chr13 | 55046824 | 55046910 | - | - |
bta-mir-128-2 | MI0009727 | 182 | chr22 | 9796002 | 9796085 | + | - |
bta-mir-129-1 | MI0009728 | 67 | chr4 | 93534084 | 93534155 | + | High |
bta-mir-129-2 | MI0009729 | 70 | chr15 | 74898231 | 74898324 | + | High |
bta-mir-130a | MI0009730 | 398 | chr15 | 82581436 | 82581524 | + | High |
bta-mir-130b | MI0009731 | 140 | chr17 | 74305539 | 74305620 | - | High |
bta-mir-133a-2 | MI0009732 | 327 | chr24 | 34932166 | 34932252 | + | High |
bta-mir-133a-1 | MI0009733 | 326 | chr13 | 55446236 | 55446330 | - | High |
bta-mir-133b | MI0009734 | 15 | chr23 | 24357763 | 24357846 | + | - |
bta-mir-134 | MI0009735 | 12 | chr21 | 67871630 | 67871702 | + | High |
bta-mir-135a-2 | MI0009736 | 10 | chr5 | 62308981 | 62309080 | + | - |
bta-mir-135a-1 | MI0009737 | 13 | chr22 | 49324825 | 49324914 | + | - |
bta-mir-135b | MI0009738 | 3 | chr16 | 3040637 | 3040731 | - | - |
bta-mir-136 | MI0009739 | 406 | chr21 | 67710178 | 67710269 | + | High |
bta-mir-137 | MI0009740 | 9 | chr3 | 45682235 | 45682336 | + | - |
bta-mir-138-1 | MI0009741 | 44 | chr22 | 14939860 | 14939956 | + | - |
bta-mir-141 | MI0009742 | 5793 | chr5 | 104149742 | 104149831 | - | High |
bta-mir-143 | MI0009743 | 223303 | chr7 | 63079071 | 63079171 | + | - |
bta-mir-144 | MI0009744 | 30 | chr19 | 20923025 | 20923108 | - | High |
bta-mir-146b | MI0009745 | 361 | chr26 | 23050499 | 23050604 | + | - |
bta-mir-146a | MI0009746 | 926 | chr7 | 74529534 | 74529632 | + | High |
bta-mir-147 | MI0009747 | 86 | chr10 | 65449944 | 65450023 | - | High |
bta-mir-152 | MI0009748 | 219 | chr19 | 39247030 | 39247115 | + | High |
bta-mir-153-1 | MI0009749 | 14 | chr2 | 108346811 | 108346900 | - | - |
bta-mir-153-2 | MI0009750 | 16 | chr4 | 119976209 | 119976295 | - | - |
bta-mir-154a | MI0009751 | 10 | chr21 | 67876412 | 67876495 | + | High |
bta-mir-155 | MI0009752 | 184 | chr1 | 10259259 | 10259321 | - | - |
bta-mir-16a | MI0009753 | 574 | chr12 | 19660386 | 19660474 | - | High |
bta-mir-181d | MI0009754 | 44 | chr7 | 12978911 | 12979023 | + | - |
bta-mir-182 | MI0009755 | 1309 | chr4 | 94719929 | 94720039 | - | - |
bta-mir-183 | MI0009756 | 126 | chr4 | 94724660 | 94724729 | - | High |
bta-mir-184 | MI0009757 | 131 | chr21 | 25988851 | 25988933 | + | - |
bta-mir-185 | MI0009758 | 348 | chr17 | 75173467 | 75173545 | + | High |
bta-mir-187 | MI0009759 | 5 | chr24 | 21595499 | 21595607 | + | - |
bta-mir-188 | MI0009760 | 10 | chrX | 93935739 | 93935824 | + | High |
bta-mir-24-1 | MI0009761 | 551 | chr8 | 83484370 | 83484437 | + | High |
bta-mir-190a | MI0009762 | 22 | chr10 | 47479144 | 47479228 | - | High |
bta-mir-190b | MI0009763 | 5 | chr3 | 16531292 | 16531370 | + | - |
bta-mir-193b | MI0009764 | 283 | chr25 | 13397029 | 13397111 | + | - |
bta-mir-194-2 | MI0009765 | 4433 | chr29 | 44018295 | 44018377 | + | High |
bta-mir-196a-2 | MI0009766 | 96 | chr5 | 26246499 | 26246583 | - | High |
bta-mir-196a-1 | MI0009767 | 118 | chr19 | 38661613 | 38661714 | + | High |
bta-mir-196b | MI0009768 | 201 | chr4 | 69566921 | 69567005 | + | - |
bta-mir-197 | MI0009769 | 111 | chr3 | 34176846 | 34176926 | - | - |
bta-mir-199a-2 | MI0009770 | 3202 | chr7 | 16580964 | 16581034 | - | High |
bta-mir-202 | MI0009771 | 1 | chr26 | 26121795 | 26121893 | + | - |
bta-mir-206 | MI0009772 | 65 | chr23 | 24353667 | 24353752 | + | - |
bta-mir-208a | MI0009773 | 0 | chr10 | 21413140 | 21413210 | + | - |
bta-mir-208b | MI0009774 | 2 | chr10 | 21384239 | 21384315 | + | - |
bta-mir-211 | MI0009775 | 29 | chr21 | 28130528 | 28130637 | - | - |
bta-mir-212 | MI0009776 | 30 | chr19 | 23783918 | 23784028 | - | - |
bta-mir-216a | MI0009777 | 10 | chr11 | 38653549 | 38653657 | - | - |
bta-mir-216b | MI0009778 | 7 | chr11 | 38669941 | 38670022 | - | - |
bta-mir-217 | MI0009779 | 10 | chr11 | 38641311 | 38641420 | - | - |
bta-mir-218-1 | MI0009780 | 65 | chr6 | 41756487 | 41756596 | + | - |
bta-mir-219-1 | MI0009781 | 3 | chr11 | 99257286 | 99257381 | - | - |
bta-mir-223 | MI0009782 | 722 | chrX | 101046347 | 101046454 | - | High |
bta-mir-224 | MI0009783 | 169 | chrX | 34881360 | 34881440 | - | - |
bta-mir-26a-1 | MI0009784 | 21970 | chr22 | 11513974 | 11514063 | + | - |
bta-mir-28 | MI0009785 | 1738 | chr1 | 79540068 | 79540153 | - | High |
bta-mir-296 | MI0009786 | 62 | chr13 | 58333114 | 58333191 | + | High |
bta-mir-299 | MI0009787 | 40 | chr21 | 67841943 | 67842005 | + | High |
bta-mir-29d | MI0009788 | 302 | chr16 | 77816279 | 77816366 | + | High |
bta-mir-301a | MI0009789 | 341 | chr19 | 10448153 | 10448237 | - | - |
bta-mir-301b | MI0009790 | 30 | chr17 | 74305850 | 74305944 | - | - |
bta-mir-302a | MI0009791 | 0 | chr6 | 14305767 | 14305836 | + | - |
bta-mir-302d | MI0009792 | 0 | chr6 | 14305944 | 14306013 | + | - |
bta-mir-302b | MI0009793 | 1 | chr6 | 14305231 | 14305305 | + | - |
bta-mir-302c | MI0009794 | 0 | chr6 | 14305374 | 14305441 | + | - |
bta-mir-30f | MI0009795 | 368 | chr9 | 10781518 | 10781601 | - | - |
bta-mir-32 | MI0009796 | 138 | chr8 | 100883622 | 100883691 | - | High |
bta-mir-323 | MI0009797 | 7 | chr21 | 67843841 | 67843926 | + | - |
bta-mir-324 | MI0009798 | 26 | chr19 | 27713361 | 27713449 | - | High |
bta-mir-326 | MI0009799 | 14 | chr15 | 55587182 | 55587276 | - | - |
bta-mir-328 | MI0009800 | 23 | chr18 | 35062240 | 35062331 | - | - |
bta-mir-329a | MI0009801 | 9 | chr21 | 67845190 | 67845272 | + | - |
bta-mir-329b | MI0009802 | 13 | chr21 | 67844880 | 67844962 | + | - |
bta-mir-330 | MI0009803 | 52 | chr18 | 53898387 | 53898480 | - | High |
bta-mir-335 | MI0009804 | 104 | chr4 | 95385649 | 95385740 | + | High |
bta-mir-338 | MI0009805 | 105 | chr19 | 52407324 | 52407415 | + | - |
bta-mir-339a | MI0009806 | 305 | chr25 | 42489153 | 42489230 | + | - |
bta-mir-33a | MI0009807 | 65 | chr5 | 113746881 | 113746949 | + | High |
bta-mir-33b | MI0009808 | 45 | chr19 | 35416499 | 35416592 | + | - |
bta-mir-340 | MI0009809 | 252 | chr7 | 1160917 | 1161011 | + | High |
bta-mir-346 | MI0009810 | 8 | chr28 | 41491751 | 41491845 | - | - |
bta-mir-362 | MI0009811 | 43 | chrX | 93947354 | 93947418 | + | High |
bta-mir-365-2 | MI0009812 | 137 | chr19 | 18918387 | 18918497 | - | - |
bta-mir-367 | MI0009813 | 1 | chr6 | 14306070 | 14306137 | + | - |
bta-mir-370 | MI0009814 | 21 | chr21 | 67735997 | 67736071 | + | High |
bta-mir-371 | MI0009815 | 4 | chr18 | 61434710 | 61434788 | - | - |
bta-mir-374b | MI0009816 | 112 | chrX | 82989913 | 82990007 | + | High |
bta-mir-375 | MI0009817 | 1613 | chr2 | 108046949 | 108047012 | - | - |
bta-mir-377 | MI0009818 | 11 | chr21 | 67878863 | 67878931 | + | High |
bta-mir-378-1 | MI0009819 | 4644 | chr7 | 63343197 | 63343262 | + | High |
bta-mir-379 | MI0009820 | 43 | chr21 | 67840242 | 67840327 | + | High |
bta-mir-381 | MI0009821 | 186 | chr21 | 67861446 | 67861520 | + | High |
bta-mir-382 | MI0009822 | 30 | chr21 | 67871251 | 67871326 | + | High |
bta-mir-383 | MI0009823 | 10 | chr27 | 21444823 | 21444895 | + | - |
bta-mir-409a | MI0009824 | 378 | chr21 | 67881619 | 67881697 | + | High |
bta-mir-410 | MI0009825 | 224 | chr21 | 67882238 | 67882318 | + | - |
bta-mir-411a | MI0009826 | 2437 | chr21 | 67841471 | 67841552 | + | High |
bta-mir-412 | MI0009827 | 19 | chr21 | 67881761 | 67881850 | + | - |
bta-mir-421 | MI0009828 | 115 | chrX | 82990081 | 82990165 | + | High |
bta-mir-429 | MI0009829 | 551 | chr16 | 52693343 | 52693426 | - | - |
bta-mir-431 | MI0009830 | 18 | chr21 | 67706530 | 67706643 | + | - |
bta-mir-432 | MI0009831 | 47 | chr21 | 67709994 | 67710083 | + | High |
bta-mir-433 | MI0009832 | 10 | chr21 | 67707406 | 67707529 | + | - |
bta-mir-448 | MI0009833 | None | chrX | 68837562 | 68837672 | + | - |
bta-mir-449a | MI0009834 | 17 | chr20 | 24047150 | 24047237 | + | - |
bta-mir-449b | MI0009835 | 10 | chr20 | 24047026 | 24047123 | + | - |
bta-mir-449c | MI0009836 | 11 | chr20 | 24042743 | 24042848 | - | - |
bta-mir-451 | MI0009837 | 80 | chr19 | 20922863 | 20922933 | - | - |
bta-mir-452 | MI0009838 | 411 | chrX | 34882394 | 34882478 | - | High |
bta-mir-453 | MI0009839 | None | chr21 | 67873059 | 67873138 | + | - |
bta-mir-454 | MI0009840 | 44 | chr19 | 10438492 | 10438605 | - | High |
bta-mir-483 | MI0009841 | 18 | chr29 | 50396051 | 50396118 | + | - |
bta-mir-485 | MI0009842 | 12 | chr21 | 67872328 | 67872400 | + | High |
bta-mir-486 | MI0009843 | 516 | chr27 | 36501847 | 36501970 | - | - |
bta-mir-488 | MI0009844 | 2 | chr16 | 59871602 | 59871697 | - | - |
bta-mir-490 | MI0009845 | 96 | chr4 | 101783304 | 101783430 | + | High |
bta-mir-491 | MI0009846 | 12 | chr8 | 23748999 | 23749082 | - | High |
bta-mir-493 | MI0009847 | 68 | chr21 | 67695365 | 67695453 | + | High |
bta-mir-494 | MI0009848 | 22 | chr21 | 67848049 | 67848133 | + | - |
bta-mir-495 | MI0009849 | 21 | chr21 | 67851608 | 67851688 | + | - |
bta-mir-496 | MI0009850 | 3 | chr21 | 67877242 | 67877342 | + | - |
bta-mir-500 | MI0009851 | 289 | chrX | 93948610 | 93948693 | + | High |
bta-mir-502a-1 | MI0009852 | 126 | chrX | 93952708 | 93952792 | + | - |
bta-mir-502a-2 | MI0009853 | 125 | chrX | 93942730 | 93942819 | + | - |
bta-mir-502b | MI0009854 | 61 | chrX | 93946864 | 93946946 | + | - |
bta-mir-504 | MI0009855 | 51 | chrX | 22201445 | 22201527 | - | - |
bta-mir-505 | MI0009856 | 48 | chrX | 23507268 | 23507357 | - | - |
bta-mir-539 | MI0009857 | 19 | chr21 | 67862745 | 67862822 | + | - |
bta-mir-541 | MI0009858 | 23 | chr21 | 67880717 | 67880800 | + | High |
bta-mir-543 | MI0009859 | 10 | chr21 | 67850198 | 67850277 | + | High |
bta-mir-544b-1 | MI0009860 | 0 | chr13 | 71024260 | 71024344 | + | - |
bta-mir-544b-2 | MI0009861 | 0 | chr24 | 35704382 | 35704473 | - | - |
bta-mir-544a | MI0009862 | 8 | chr21 | 67864731 | 67864821 | + | - |
bta-mir-551a | MI0009863 | 0 | chr16 | 50918846 | 50918940 | + | - |
bta-mir-551b | MI0009864 | 1 | chr1 | 100049884 | 100049978 | - | - |
bta-mir-562 | MI0009865 | 1 | chr25 | 13858437 | 13858518 | - | - |
bta-mir-568 | MI0009866 | 0 | chr1 | 59568869 | 59568962 | - | - |
bta-mir-582 | MI0009867 | 34 | chr20 | 19665474 | 19665571 | + | High |
bta-mir-584-2 | MI0009868 | 0 | chr19 | 37038586 | 37038674 | + | - |
bta-mir-584-3 | MI0009869 | 0 | chr28 | 30963288 | 30963372 | + | - |
bta-mir-584-4 | MI0009870 | 0 | chr22 | 35820205 | 35820280 | + | - |
bta-mir-584-5 | MI0009871 | 0 | chr4 | 9649520 | 9649614 | - | - |
bta-mir-584-6 | MI0009872 | 0 | chr20 | 6270229 | 6270304 | - | - |
bta-mir-584-7 | MI0009873 | 0 | chr29 | 37581517 | 37581583 | + | - |
bta-mir-584-1 | MI0009874 | 0 | chr14 | 69648184 | 69648259 | + | - |
bta-mir-592 | MI0009875 | 4 | chr4 | 92442143 | 92442238 | - | - |
bta-mir-599 | MI0009876 | 0 | chr14 | 67323940 | 67324034 | + | - |
bta-mir-615 | MI0009877 | 25 | chr5 | 26204589 | 26204681 | - | High |
bta-mir-628 | MI0009878 | 21 | chr10 | 55187418 | 55187512 | + | High |
bta-mir-631 | MI0009879 | None | chr21 | 33979103 | 33979177 | + | - |
bta-mir-653 | MI0009880 | 2 | chr4 | 10717971 | 10718060 | - | - |
bta-mir-654 | MI0009881 | 17 | chr21 | 67857212 | 67857292 | + | - |
bta-mir-655 | MI0009882 | 15 | chr21 | 67865688 | 67865784 | + | - |
bta-mir-656 | MI0009883 | 2 | chr21 | 67883062 | 67883140 | + | - |
bta-mir-658 | MI0009884 | 0 | chr5 | 110470523 | 110470622 | - | - |
bta-mir-665 | MI0009885 | 27 | chr21 | 67702209 | 67702280 | + | - |
bta-mir-670 | MI0009886 | 8 | chr15 | 74872328 | 74872426 | + | - |
bta-mir-671 | MI0009887 | 40 | chr4 | 115031675 | 115031792 | + | High |
bta-mir-708 | MI0009889 | 153 | chr29 | 16770523 | 16770631 | + | High |
bta-mir-744 | MI0009891 | 72 | chr19 | 31492233 | 31492332 | + | High |
bta-mir-758 | MI0009892 | 2 | chr21 | 67844139 | 67844226 | + | - |
bta-mir-759 | MI0009893 | None | chr12 | 11026563 | 11026658 | - | - |
bta-mir-760 | MI0009894 | 55 | chr3 | 50024716 | 50024832 | - | High |
bta-mir-761 | MI0009895 | None | chr3 | 95392259 | 95392334 | + | - |
bta-mir-763 | MI0009896 | 0 | chr5 | 48331034 | 48331153 | - | - |
bta-mir-767 | MI0009897 | 13 | chrX | 35237578 | 35237682 | - | - |
bta-mir-769 | MI0009898 | 161 | chr18 | 54188012 | 54188130 | + | - |
bta-mir-873 | MI0009899 | 6 | chr8 | 15227232 | 15227308 | + | - |
bta-mir-874 | MI0009900 | 48 | chr7 | 50886238 | 50886313 | - | High |
bta-mir-875 | MI0009901 | 0 | chr14 | 67323808 | 67323884 | + | - |
bta-mir-876 | MI0009902 | 2 | chr8 | 15250896 | 15250976 | + | - |
bta-mir-877 | MI0009903 | 49 | chr23 | 28284423 | 28284524 | - | - |
bta-mir-885 | MI0009904 | 97 | chr22 | 55292168 | 55292241 | - | - |
bta-mir-92a-1 | MI0009905 | 5255 | chr12 | 66421937 | 66422014 | + | - |
bta-mir-92b | MI0009906 | 396 | chr3 | 15638041 | 15638136 | - | - |
bta-mir-935 | MI0009908 | 2 | chr18 | 62402146 | 62402236 | + | - |
bta-mir-940 | MI0009909 | 1 | chr25 | 1803355 | 1803447 | + | - |
bta-mir-95 | MI0009910 | 18 | chr6 | 119616064 | 119616144 | - | - |
bta-mir-96 | MI0009911 | 130 | chr4 | 94724422 | 94724524 | - | - |
bta-mir-9-1 | MI0009912 | 179 | chr21 | 21326580 | 21326669 | + | High |
bta-mir-9-2 | MI0009913 | 179 | chr7 | 90950499 | 90950585 | - | High |
bta-mir-1225 | MI0010452 | 3 | chr25 | 1638363 | 1638455 | - | - |
bta-mir-584-8 | MI0010453 | 0 | chrX | 146623081 | 146623168 | + | - |
bta-mir-29e | MI0010454 | 287 | chr16 | 77815740 | 77815820 | + | - |
bta-mir-1282 | MI0010455 | None | chr21 | 56214395 | 56214495 | - | - |
bta-mir-1284 | MI0010456 | None | chr22 | 30351546 | 30351663 | + | - |
bta-mir-376a | MI0010457 | 34 | chr21 | 67857794 | 67857892 | + | High |
bta-mir-1291 | MI0010458 | 10 | chr5 | 31345647 | 31345720 | + | - |
bta-mir-1179 | MI0010459 | 1 | chr21 | 20044885 | 20044974 | + | - |
bta-mir-1301 | MI0010460 | 0 | chr11 | 74189210 | 74189289 | + | - |
bta-mir-7-2 | MI0010462 | 181 | chr8 | 79020781 | 79020889 | - | High |
bta-mir-1256 | MI0010463 | 0 | chr12 | 57668832 | 57668913 | - | - |
bta-mir-29b-1 | MI0010464 | 359 | chr4 | 95727243 | 95727323 | - | - |
bta-mir-1835 | MI0010465 | 0 | chr5 | 76263665 | 76263727 | - | - |
bta-mir-1281 | MI0010466 | 0 | chr5 | 113137849 | 113137902 | + | - |
bta-mir-1251 | MI0010467 | None | chr5 | 62234415 | 62234484 | + | - |
bta-mir-1296 | MI0010468 | 129 | chr28 | 19648967 | 19649057 | - | - |
bta-mir-1193 | MI0010469 | 1 | chr21 | 67848381 | 67848485 | + | - |
bta-mir-1197 | MI0010470 | 6 | chr21 | 67843672 | 67843768 | + | - |
bta-mir-7-1 | MI0010471 | 99 | chr21 | 20048987 | 20049084 | + | - |
bta-mir-1839 | MI0010473 | 210 | chr14 | 1928039 | 1928110 | - | - |
bta-mir-1307 | MI0010474 | 593 | chr26 | 24356476 | 24356624 | - | High |
bta-mir-1298 | MI0010475 | 4 | chrX | 68750834 | 68750941 | + | - |
bta-mir-1287 | MI0010476 | None | chr26 | 19457906 | 19457996 | - | - |
bta-mir-1248-1 | MI0010477 | 13 | chr1 | 81349834 | 81349938 | - | - |
bta-mir-1185 | MI0010478 | 15 | chr21 | 67859743 | 67859828 | + | High |
bta-mir-1306 | MI0010479 | 89 | chr17 | 75194445 | 75194502 | + | - |
bta-mir-1271 | MI0010480 | 38 | chr7 | 39336532 | 39336617 | + | High |
bta-mir-1249 | MI0010481 | 22 | chr5 | 116683134 | 116683198 | - | - |
bta-mir-1248-2 | MI0010483 | 13 | chr10 | 58304556 | 58304660 | + | - |
bta-mir-181a-1 | MI0010484 | 8643 | chr16 | 79940482 | 79940591 | - | High |
bta-mir-181b-1 | MI0010485 | 463 | chr16 | 79940310 | 79940419 | - | - |