Stem-loop bta-mir-432

Accession

MI0009831

Description

Bos taurus bta-mir-432 precursor miRNA

Literature search

6 open access papers mention bta-mir-432
(16 sentences)

Sequence

3413 reads, 47 reads per million, 64 experiments

gcaugacuccuccaagUCUUGGAGUAGGUCAUUGGGUGGauccuuuauuucccuaugugggccacuggauggcuccuccaugucuuggcg
...........(((((.(.(((((..(((((((.(((((.(((..(((......))).)))))))).))))))).))))).).)))))..

Structure

gcaugacuccu     U U     UA       G     a   uu   uu 
           ccaag C UGGAG  GGUCAUU GGUGG ucc  uau  c
           ||||| | |||||  ||||||| ||||| |||  |||   
           gguuc g accuc  ucgguag ucacc ggg  gua  c
---------gc     u u     -c       g     -   -u   uc 

Annotation confidence High

Genome context

chr21: 67709994-67710083 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from bta-mir-432

Mature bta-miR-432

• Accession: MIMAT0009317
• Description: Bos taurus bta-miR-432 mature miRNA
• Sequence: 17 - UCUUGGAGUAGGUCAUUGGGUGG - 39
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125