Stem-loop bta-mir-432

Accession

MI0009831

Description

Bos taurus bta-mir-432 precursor miRNA

Literature search

17 open access papers mention bta-mir-432
(64 sentences)

Sequence

190605 reads, 119.0 reads per million, 311 experiments

gcaugacuccuccaagUCUUGGAGUAGGUCAUUGGGUGgauccuuuauuucccuaugugggccaCUGGAUGGCUCCUCCAUGUCUuggcg
...........(((((.(.(((((..(((((((.(((((.(((..(((......))).)))))))).))))))).))))).).)))))..

Structure

gcaugacuccu     U U     UA       G     a   uu   uu 
           ccaag C UGGAG  GGUCAUU GGUGg ucc  uau  c
           ||||| | |||||  ||||||| ||||| |||  |||   
           gguUC G ACCUC  UCGGUAG UCacc ggg  gua  c
---------gc     U U     -C       G     -   -u   uc 

Annotation confidence High

Genome context

21: 65782181-65782270 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from bta-mir-432

Mature bta-miR-432-5p

• Accession: MIMAT0009317
• Description: Bos taurus bta-miR-432-5p mature miRNA
• Sequence: 17 - UCUUGGAGUAGGUCAUUGGGUG - 38
• Evidence: not_experimental

Mature bta-miR-432-3p

• Accession: MIMAT0061016
• Description: Bos taurus bta-miR-432-3p mature miRNA
• Sequence: 65 - CUGGAUGGCUCCUCCAUGUCU - 85
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125