Stem-loop bta-mir-495

Accession

MI0009849

Description

Bos taurus bta-mir-495 precursor miRNA

Literature search

35 open access papers mention bta-mir-495
(178 sentences)

Sequence

361124 reads, 173.0 reads per million, 302 experiments

uggugccuggaaaGAAGUUGCCCAUGUUCUUUUCGcugauaugugacgAAACAAACAUGGUGCACUUCUUuuccggcauca
(((((((.((((((((((.(((((((((..((((((........).)))))..))))))).)))))))))))).)))))))

Structure

       u          U  -       CU     - uga 
uggugcc ggaaaGAAGU GC CCAUGUU  UUUCG c   u
||||||| |||||||||| || |||||||  ||||| |    
acuacgg cuuUUCUUCA CG GGUACAA  AAAgc g   a
       c          -  U       AC     a ugu 

Annotation confidence High

Genome context

21: 65923874-65923954 [+]

Clustered miRNAs

22 other miRNAs are < 10 kb from bta-mir-495

Mature bta-miR-495-5p

• Accession: MIMAT0050872
• Description: Bos taurus bta-miR-495-5p mature miRNA
• Sequence: 14 - GAAGUUGCCCAUGUUCUUUUCG - 35
• Evidence: experimental ; cloned [3]

Mature bta-miR-495-3p

• Accession: MIMAT0009335
• Description: Bos taurus bta-miR-495-3p mature miRNA
• Sequence: 49 - AAACAAACAUGGUGCACUUCUU - 70
• Evidence: experimental ; cloned [3]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


3. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125